Cellular Genomics Informatics

Pinned Loading

1. STARsoloSTARsoloPublic

   wrapper scripts for convenient STARsolo processing of 10X and other scRNA-seq

   Shell 92 9

2. reprocess_public_10xreprocess_public_10xPublic

   Scripts to help get fastqs

   Shell 19 3

3. c2lc2lPublic

   Set of scripts to run cell2location on farm

   Jupyter Notebook 2

4. nf-cellbendernf-cellbenderPublic

   Nextflow implementation of Cellbender

   R

5. sceasysceasyPublic

   A package to help convert different single-cell data formats to each other

   R 470 69

6. schardschardPublic

   reticulate-free single cell format conversion

   R 219 17