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Cherab EDGE2D

Cherab add-on module for EDGE2D simulations.

This module enables the creation of Cherab plasma objects from EDGE2D simulations. EDGE2D tran files are supported. Please see the examples in the demos directory for an illustration of how to use the module.

Installation

It is recommended to install Cherab in a virtual environment. This will enable installation of packages without modifying the system Python installation, which is particularly important on shared systems. To create a virtual environment, do the following:

python3 -m venv ~/venvs/cherab-venv

After the virtual environment is created, it can be activated by running:

source~/venvs/cherab-venv/bin/activate

Users

This module depends on the core Cherab framework and Eproc EDGE2D processing library.

Cherab core, and all of its dependencies, are available on PyPI and can be installed using pip. However, the EDGE2D module will need to be installed from this repository.

Note also that a bug in Cython prevents Cherab submodules from installing correctly. This bug is fixed, but not yet released in the stable version of Cython. As a result, you will need to install the latest alpha version of Cython before installing this package.

First, clone this repository, then do:

pip install -U cython==3.0a5
pip install cherab
pip install <path-to-cherab-edge2d>

This will pull in cherab-core, raysectnumpy and other dependencies, then build and install the EDGE2D module.

Eproc can be obtained from CCFE Gitlab repository. Note that Eproc is tied to JET computing clusters (Freia/Heimdall).

Numpy 1.17.4 is required to call Eproc functions from Python 3.7:

pip install --user numpy==1.17.4

When installed, update the .bashrc file to setup the environment:

EPROCDIR=~/eproc
export IDL_PATH=$EPROCDIR/idl/pro:$EPROCDIR/idl/prolib:$IDL_PATHexport IDL_PATH=$EPROCDIR/python/eproc:$EPROCDIR/python/eproc:$IDL_PATHexport LD_LIBRARY_PATH=$EPROCDIR/lib64:$EPROCDIR/lib64:$LD_LIBRARY_PATHexport PYTHONPATH=$PYTHONPATH:$EPROCDIR/python
export PYTHONPATH=$PYTHONPATH:$EPROCDIR/python/eproc

Developers

For developing the code, it is recommended to use local checkouts of cherab-core and raysect, as well as cherab-edge2d. Development should be done against the development branch of this repository, and any modifications submitted as pull requests to be merged back into development.

To install the package in develop mode, so that local changes are immediately visible without needing to reinstall, install with:

pip install -e <path-to-cherab-edge2d>

If you are modifying Cython files you will need to run ./dev/build.sh from this directory in order to rebuild the extension modules. They will then be used when Python is restarted.

About

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all 
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

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Repository files navigation
Cherab EDGE2D
Cherab add-on module for EDGE2D simulations.
This module enables the creation of Cherab plasma objects from EDGE2D simulations.
EDGE2D tran files are supported.
Please see the examples in the demos directory for an illustration of how to use the module.
Installation
It is recommended to install Cherab in a virtual environment.
This will enable installation of packages without modifying the system Python installation, which is particularly important on shared systems.
To create a virtual environment, do the following:
python3 -m venv ~/venvs/cherab-venv
After the virtual environment is created, it can be activated by running:
source~/venvs/cherab-venv/bin/activate
Users
This module depends on the core Cherab framework and Eproc EDGE2D processing library.
Cherab core, and all of its dependencies, are available on PyPI and can be installed using pip.
However, the EDGE2D module will need to be installed from this repository.
Note also that a bug in Cython prevents Cherab submodules from installing correctly.
This bug is fixed, but not yet released in the stable version of Cython.
As a result, you will need to install the latest alpha version of Cython before installing this package.
First, clone this repository, then do:
pip install -U cython==3.0a5
pip install cherab
pip install <path-to-cherab-edge2d>
This will pull in cherab-core, raysectnumpy and other dependencies, then build and install the EDGE2D module.
Eproc can be obtained from CCFE Gitlab repository.
Note that Eproc is tied to JET computing clusters (Freia/Heimdall).
Numpy 1.17.4 is required to call Eproc functions from Python 3.7:
pip install --user numpy==1.17.4
When installed, update the .bashrc file to setup the environment:
EPROCDIR=~/eproc
export IDL_PATH=$EPROCDIR/idl/pro:$EPROCDIR/idl/prolib:$IDL_PATHexport IDL_PATH=$EPROCDIR/python/eproc:$EPROCDIR/python/eproc:$IDL_PATHexport LD_LIBRARY_PATH=$EPROCDIR/lib64:$EPROCDIR/lib64:$LD_LIBRARY_PATHexport PYTHONPATH=$PYTHONPATH:$EPROCDIR/python
export PYTHONPATH=$PYTHONPATH:$EPROCDIR/python/eproc
Developers
For developing the code, it is recommended to use local checkouts of cherab-core and raysect, as well as cherab-edge2d.
Development should be done against the development branch of this repository, and any modifications submitted as pull requests to be merged back into development.
To install the package in develop mode, so that local changes are immediately visible without needing to reinstall, install with:
pip install -e <path-to-cherab-edge2d>

If you are modifying Cython files you will need to run ./dev/build.sh from this directory in order to rebuild the extension modules.
They will then be used when Python is restarted.
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix");
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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Repository files navigation
Cherab EDGE2D
Cherab add-on module for EDGE2D simulations.
This module enables the creation of Cherab plasma objects from EDGE2D simulations.
EDGE2D tran files are supported.
Please see the examples in the demos directory for an illustration of how to use the module.
Installation
It is recommended to install Cherab in a virtual environment.
This will enable installation of packages without modifying the system Python installation, which is particularly important on shared systems.
To create a virtual environment, do the following:
python3 -m venv ~/venvs/cherab-venv
After the virtual environment is created, it can be activated by running:
source~/venvs/cherab-venv/bin/activate
Users
This module depends on the core Cherab framework and Eproc EDGE2D processing library.
Cherab core, and all of its dependencies, are available on PyPI and can be installed using pip.
However, the EDGE2D module will need to be installed from this repository.
Note also that a bug in Cython prevents Cherab submodules from installing correctly.
This bug is fixed, but not yet released in the stable version of Cython.
As a result, you will need to install the latest alpha version of Cython before installing this package.
First, clone this repository, then do:
pip install -U cython==3.0a5
pip install cherab
pip install <path-to-cherab-edge2d>
This will pull in cherab-core, raysectnumpy and other dependencies, then build and install the EDGE2D module.
Eproc can be obtained from CCFE Gitlab repository.
Note that Eproc is tied to JET computing clusters (Freia/Heimdall).
Numpy 1.17.4 is required to call Eproc functions from Python 3.7:
pip install --user numpy==1.17.4
When installed, update the .bashrc file to setup the environment:
EPROCDIR=~/eproc
export IDL_PATH=$EPROCDIR/idl/pro:$EPROCDIR/idl/prolib:$IDL_PATHexport IDL_PATH=$EPROCDIR/python/eproc:$EPROCDIR/python/eproc:$IDL_PATHexport LD_LIBRARY_PATH=$EPROCDIR/lib64:$EPROCDIR/lib64:$LD_LIBRARY_PATHexport PYTHONPATH=$PYTHONPATH:$EPROCDIR/python
export PYTHONPATH=$PYTHONPATH:$EPROCDIR/python/eproc
Developers
For developing the code, it is recommended to use local checkouts of cherab-core and raysect, as well as cherab-edge2d.
Development should be done against the development branch of this repository, and any modifications submitted as pull requests to be merged back into development.
To install the package in develop mode, so that local changes are immediately visible without needing to reinstall, install with:
pip install -e <path-to-cherab-edge2d>

If you are modifying Cython files you will need to run ./dev/build.sh from this directory in order to rebuild the extension modules.
They will then be used when Python is restarted.
About
No description, website, or topics provided.
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3 watching
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1 fork
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms");
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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setup.py
Repository files navigation
Cherab EDGE2D
Cherab add-on module for EDGE2D simulations.
This module enables the creation of Cherab plasma objects from EDGE2D simulations.
EDGE2D tran files are supported.
Please see the examples in the demos directory for an illustration of how to use the module.
Installation
It is recommended to install Cherab in a virtual environment.
This will enable installation of packages without modifying the system Python installation, which is particularly important on shared systems.
To create a virtual environment, do the following:
python3 -m venv ~/venvs/cherab-venv
After the virtual environment is created, it can be activated by running:
source~/venvs/cherab-venv/bin/activate
Users
This module depends on the core Cherab framework and Eproc EDGE2D processing library.
Cherab core, and all of its dependencies, are available on PyPI and can be installed using pip.
However, the EDGE2D module will need to be installed from this repository.
Note also that a bug in Cython prevents Cherab submodules from installing correctly.
This bug is fixed, but not yet released in the stable version of Cython.
As a result, you will need to install the latest alpha version of Cython before installing this package.
First, clone this repository, then do:
pip install -U cython==3.0a5
pip install cherab
pip install <path-to-cherab-edge2d>
This will pull in cherab-core, raysectnumpy and other dependencies, then build and install the EDGE2D module.
Eproc can be obtained from CCFE Gitlab repository.
Note that Eproc is tied to JET computing clusters (Freia/Heimdall).
Numpy 1.17.4 is required to call Eproc functions from Python 3.7:
pip install --user numpy==1.17.4
When installed, update the .bashrc file to setup the environment:
EPROCDIR=~/eproc
export IDL_PATH=$EPROCDIR/idl/pro:$EPROCDIR/idl/prolib:$IDL_PATHexport IDL_PATH=$EPROCDIR/python/eproc:$EPROCDIR/python/eproc:$IDL_PATHexport LD_LIBRARY_PATH=$EPROCDIR/lib64:$EPROCDIR/lib64:$LD_LIBRARY_PATHexport PYTHONPATH=$PYTHONPATH:$EPROCDIR/python
export PYTHONPATH=$PYTHONPATH:$EPROCDIR/python/eproc
Developers
For developing the code, it is recommended to use local checkouts of cherab-core and raysect, as well as cherab-edge2d.
Development should be done against the development branch of this repository, and any modifications submitted as pull requests to be merged back into development.
To install the package in develop mode, so that local changes are immediately visible without needing to reinstall, install with:
pip install -e <path-to-cherab-edge2d>

If you are modifying Cython files you will need to run ./dev/build.sh from this directory in order to rebuild the extension modules.
They will then be used when Python is restarted.
About
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links");
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

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Repository files navigation
Cherab EDGE2D
Cherab add-on module for EDGE2D simulations.
This module enables the creation of Cherab plasma objects from EDGE2D simulations.
EDGE2D tran files are supported.
Please see the examples in the demos directory for an illustration of how to use the module.
Installation
It is recommended to install Cherab in a virtual environment.
This will enable installation of packages without modifying the system Python installation, which is particularly important on shared systems.
To create a virtual environment, do the following:
python3 -m venv ~/venvs/cherab-venv
After the virtual environment is created, it can be activated by running:
source~/venvs/cherab-venv/bin/activate
Users
This module depends on the core Cherab framework and Eproc EDGE2D processing library.
Cherab core, and all of its dependencies, are available on PyPI and can be installed using pip.
However, the EDGE2D module will need to be installed from this repository.
Note also that a bug in Cython prevents Cherab submodules from installing correctly.
This bug is fixed, but not yet released in the stable version of Cython.
As a result, you will need to install the latest alpha version of Cython before installing this package.
First, clone this repository, then do:
pip install -U cython==3.0a5
pip install cherab
pip install <path-to-cherab-edge2d>
This will pull in cherab-core, raysectnumpy and other dependencies, then build and install the EDGE2D module.
Eproc can be obtained from CCFE Gitlab repository.
Note that Eproc is tied to JET computing clusters (Freia/Heimdall).
Numpy 1.17.4 is required to call Eproc functions from Python 3.7:
pip install --user numpy==1.17.4
When installed, update the .bashrc file to setup the environment:
EPROCDIR=~/eproc
export IDL_PATH=$EPROCDIR/idl/pro:$EPROCDIR/idl/prolib:$IDL_PATHexport IDL_PATH=$EPROCDIR/python/eproc:$EPROCDIR/python/eproc:$IDL_PATHexport LD_LIBRARY_PATH=$EPROCDIR/lib64:$EPROCDIR/lib64:$LD_LIBRARY_PATHexport PYTHONPATH=$PYTHONPATH:$EPROCDIR/python
export PYTHONPATH=$PYTHONPATH:$EPROCDIR/python/eproc
Developers
For developing the code, it is recommended to use local checkouts of cherab-core and raysect, as well as cherab-edge2d.
Development should be done against the development branch of this repository, and any modifications submitted as pull requests to be merged back into development.
To install the package in develop mode, so that local changes are immediately visible without needing to reinstall, install with:
pip install -e <path-to-cherab-edge2d>

If you are modifying Cython files you will need to run ./dev/build.sh from this directory in order to rebuild the extension modules.
They will then be used when Python is restarted.
About
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default");
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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Repository files navigation
Cherab EDGE2D
Cherab add-on module for EDGE2D simulations.
This module enables the creation of Cherab plasma objects from EDGE2D simulations.
EDGE2D tran files are supported.
Please see the examples in the demos directory for an illustration of how to use the module.
Installation
It is recommended to install Cherab in a virtual environment.
This will enable installation of packages without modifying the system Python installation, which is particularly important on shared systems.
To create a virtual environment, do the following:
python3 -m venv ~/venvs/cherab-venv
After the virtual environment is created, it can be activated by running:
source~/venvs/cherab-venv/bin/activate
Users
This module depends on the core Cherab framework and Eproc EDGE2D processing library.
Cherab core, and all of its dependencies, are available on PyPI and can be installed using pip.
However, the EDGE2D module will need to be installed from this repository.
Note also that a bug in Cython prevents Cherab submodules from installing correctly.
This bug is fixed, but not yet released in the stable version of Cython.
As a result, you will need to install the latest alpha version of Cython before installing this package.
First, clone this repository, then do:
pip install -U cython==3.0a5
pip install cherab
pip install <path-to-cherab-edge2d>
This will pull in cherab-core, raysectnumpy and other dependencies, then build and install the EDGE2D module.
Eproc can be obtained from CCFE Gitlab repository.
Note that Eproc is tied to JET computing clusters (Freia/Heimdall).
Numpy 1.17.4 is required to call Eproc functions from Python 3.7:
pip install --user numpy==1.17.4
When installed, update the .bashrc file to setup the environment:
EPROCDIR=~/eproc
export IDL_PATH=$EPROCDIR/idl/pro:$EPROCDIR/idl/prolib:$IDL_PATHexport IDL_PATH=$EPROCDIR/python/eproc:$EPROCDIR/python/eproc:$IDL_PATHexport LD_LIBRARY_PATH=$EPROCDIR/lib64:$EPROCDIR/lib64:$LD_LIBRARY_PATHexport PYTHONPATH=$PYTHONPATH:$EPROCDIR/python
export PYTHONPATH=$PYTHONPATH:$EPROCDIR/python/eproc
Developers
For developing the code, it is recommended to use local checkouts of cherab-core and raysect, as well as cherab-edge2d.
Development should be done against the development branch of this repository, and any modifications submitted as pull requests to be merged back into development.
To install the package in develop mode, so that local changes are immediately visible without needing to reinstall, install with:
pip install -e <path-to-cherab-edge2d>

If you are modifying Cython files you will need to run ./dev/build.sh from this directory in order to rebuild the extension modules.
They will then be used when Python is restarted.
About
No description, website, or topics provided.
Resources
Readme
License
Activity
Custom properties
Stars
1 star
Watchers
3 watching
Forks
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if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers");
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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Cherab EDGE2D
Cherab add-on module for EDGE2D simulations.
This module enables the creation of Cherab plasma objects from EDGE2D simulations.
EDGE2D tran files are supported.
Please see the examples in the demos directory for an illustration of how to use the module.
Installation
It is recommended to install Cherab in a virtual environment.
This will enable installation of packages without modifying the system Python installation, which is particularly important on shared systems.
To create a virtual environment, do the following:
python3 -m venv ~/venvs/cherab-venv
After the virtual environment is created, it can be activated by running:
source~/venvs/cherab-venv/bin/activate
Users
This module depends on the core Cherab framework and Eproc EDGE2D processing library.
Cherab core, and all of its dependencies, are available on PyPI and can be installed using pip.
However, the EDGE2D module will need to be installed from this repository.
Note also that a bug in Cython prevents Cherab submodules from installing correctly.
This bug is fixed, but not yet released in the stable version of Cython.
As a result, you will need to install the latest alpha version of Cython before installing this package.
First, clone this repository, then do:
pip install -U cython==3.0a5
pip install cherab
pip install <path-to-cherab-edge2d>
This will pull in cherab-core, raysectnumpy and other dependencies, then build and install the EDGE2D module.
Eproc can be obtained from CCFE Gitlab repository.
Note that Eproc is tied to JET computing clusters (Freia/Heimdall).
Numpy 1.17.4 is required to call Eproc functions from Python 3.7:
pip install --user numpy==1.17.4
When installed, update the .bashrc file to setup the environment:
EPROCDIR=~/eproc
export IDL_PATH=$EPROCDIR/idl/pro:$EPROCDIR/idl/prolib:$IDL_PATHexport IDL_PATH=$EPROCDIR/python/eproc:$EPROCDIR/python/eproc:$IDL_PATHexport LD_LIBRARY_PATH=$EPROCDIR/lib64:$EPROCDIR/lib64:$LD_LIBRARY_PATHexport PYTHONPATH=$PYTHONPATH:$EPROCDIR/python
export PYTHONPATH=$PYTHONPATH:$EPROCDIR/python/eproc
Developers
For developing the code, it is recommended to use local checkouts of cherab-core and raysect, as well as cherab-edge2d.
Development should be done against the development branch of this repository, and any modifications submitted as pull requests to be merged back into development.
To install the package in develop mode, so that local changes are immediately visible without needing to reinstall, install with:
pip install -e <path-to-cherab-edge2d>

If you are modifying Cython files you will need to run ./dev/build.sh from this directory in order to rebuild the extension modules.
They will then be used when Python is restarted.
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, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode");
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();

Skip to content
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17 Commits
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cherab
cherab
demos
demos
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LICENCE.txt
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README.md
README.md
requirements.txt
requirements.txt
setup.py
setup.py
Repository files navigation
Cherab EDGE2D
Cherab add-on module for EDGE2D simulations.
This module enables the creation of Cherab plasma objects from EDGE2D simulations.
EDGE2D tran files are supported.
Please see the examples in the demos directory for an illustration of how to use the module.
Installation
It is recommended to install Cherab in a virtual environment.
This will enable installation of packages without modifying the system Python installation, which is particularly important on shared systems.
To create a virtual environment, do the following:
python3 -m venv ~/venvs/cherab-venv
After the virtual environment is created, it can be activated by running:
source~/venvs/cherab-venv/bin/activate
Users
This module depends on the core Cherab framework and Eproc EDGE2D processing library.
Cherab core, and all of its dependencies, are available on PyPI and can be installed using pip.
However, the EDGE2D module will need to be installed from this repository.
Note also that a bug in Cython prevents Cherab submodules from installing correctly.
This bug is fixed, but not yet released in the stable version of Cython.
As a result, you will need to install the latest alpha version of Cython before installing this package.
First, clone this repository, then do:
pip install -U cython==3.0a5
pip install cherab
pip install <path-to-cherab-edge2d>
This will pull in cherab-core, raysectnumpy and other dependencies, then build and install the EDGE2D module.
Eproc can be obtained from CCFE Gitlab repository.
Note that Eproc is tied to JET computing clusters (Freia/Heimdall).
Numpy 1.17.4 is required to call Eproc functions from Python 3.7:
pip install --user numpy==1.17.4
When installed, update the .bashrc file to setup the environment:
EPROCDIR=~/eproc
export IDL_PATH=$EPROCDIR/idl/pro:$EPROCDIR/idl/prolib:$IDL_PATHexport IDL_PATH=$EPROCDIR/python/eproc:$EPROCDIR/python/eproc:$IDL_PATHexport LD_LIBRARY_PATH=$EPROCDIR/lib64:$EPROCDIR/lib64:$LD_LIBRARY_PATHexport PYTHONPATH=$PYTHONPATH:$EPROCDIR/python
export PYTHONPATH=$PYTHONPATH:$EPROCDIR/python/eproc
Developers
For developing the code, it is recommended to use local checkouts of cherab-core and raysect, as well as cherab-edge2d.
Development should be done against the development branch of this repository, and any modifications submitted as pull requests to be merged back into development.
To install the package in develop mode, so that local changes are immediately visible without needing to reinstall, install with:
pip install -e <path-to-cherab-edge2d>

If you are modifying Cython files you will need to run ./dev/build.sh from this directory in order to rebuild the extension modules.
They will then be used when Python is restarted.
About
No description, website, or topics provided.
Resources
Readme
License
Activity
Custom properties
Stars
1 star
Watchers
3 watching
Forks
1 fork
Report repository
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Used by
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