VBCF NGS

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1. fastqc fastqcPublic

   csf fork of fastqc for usage on selected reads of unaligned bam file

   Java 49 40

2. illuminasavr illuminasavrPublic

   Parses and Plots Illumina SAV files

   JavaScript 13 1

3. hinkskalle hinkskallePublic

   OCI + Singularity Container Registry

   Python 9 1

4. illuminaBackup illuminaBackupPublic

   small backup program that copies the important files from illumina sequencing runs

   Scala 2 1

5. bam2fq bam2fqPublic

   bam to fastq converter ui

   Java 1

6. forskaller forskallerPublic

   simple small API for our superior in house LIMS built by Heinz

   R 1