Databio

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1. pepatacpepatacPublic

   A modular, containerized pipeline for ATAC-seq data processing

   Python 60 16

2. COCOACOCOAPublic

   Annotating epigenetic variation among samples with region sets in R

   R 11

3. LOLAwebLOLAwebPublic

   An interactive Shiny web application for genomic interval enrichment analysis using LOLA.

   R 16 2

4. awesome-atac-analysisawesome-atac-analysisPublic

   Links to ATAC-seq analysis tools

   78 7

5. MIRAMIRAPublic

   R package for Methylation-based Inference of Regulatory Activity

   R 13 2

6. pypiperpypiperPublic

   Python toolkit for building restartable pipelines

   Python 48 9