feat: added catalog functions#3

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Merged
ymarcon merged 3 commits into from
Mar 21, 2026
Merged

feat: added catalog functions #3

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ffd13a3
feat: catalog functions implemented
ymarcon Feb 23, 2026
89bd8cc
fix: search variables returned type
ymarcon Feb 23, 2026
824d778
chore: code review
ymarcon Mar 21, 2026
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4 changes: 4 additions & 0 deletions Makefile
View file
Open in desktop
Original file line numberDiff line numberDiff line change
@@ -1,6 +1,10 @@
install:
uv sync --all-extras

update:
rm -f uv.lock
uv sync

test:
uv run --all-extras pytest

Expand Down
36 changes: 36 additions & 0 deletions datashield_opal/impl.py
View file
Open in desktop
Original file line numberDiff line numberDiff line change
Expand Up@@ -142,6 +142,10 @@ def __init__(self, name: str, loginInfo: OpalClient.LoginInfo, profile: str = "d
self.rsession = None
self.rsession_started = False

def get_name(self) -> str:
"""Get the name of the connection."""
return self.name

def check_user(self) -> bool:
"""Check if the user can authenticate by trying to retrieve the current subject profile."""
try:
Expand All@@ -165,10 +169,40 @@ def list_tables(self) -> list:
return names

def has_table(self, name: str) -> bool:
# name is in format "datasource.table"
if "." not in name:
raise OpalDSError(ValueError(f"Invalid table name: {name}. Expected format 'datasource.table'"))
parts = name.split(".")
response = self._get(UriBuilder(["datasource", parts[0], "table", parts[1]]).build()).send()
return response.code == 200

def list_table_variables(self, table) -> list:
# table is in format "datasource.table"
if "." not in table:
raise OpalDSError(ValueError(f"Invalid table name: {table}. Expected format 'datasource.table'"))
tokens = table.split(".")
project_name = tokens[0]
table_name = tokens[1]
Comment thread
ymarcon marked this conversation as resolved.
return (
self
._get(UriBuilder(["datasource", project_name, "table", table_name, "variables"]).build())
.fail_on_error()
.send()
.from_json()
)
Comment thread
ymarcon marked this conversation as resolved.

def list_taxonomies(self) -> list:
return self._get(UriBuilder(["system", "conf", "taxonomies"]).build()).fail_on_error().send().from_json()

def search_variables(self, query) -> dict:
return (
self
._get(UriBuilder(["datasources", "variables", "_search"]).query("query", query).build())
.fail_on_error()
.send()
.from_json()
)
Comment thread
ymarcon marked this conversation as resolved.

def list_resources(self) -> list:
response = self._get("/projects").fail_on_error().send()
projects = response.from_json()
Expand All@@ -181,6 +215,8 @@ def list_resources(self) -> list:
return names

def has_resource(self, name: str) -> bool:
if "." not in name:
raise OpalDSError(ValueError(f"Invalid resource name: {name}. Expected format 'project.resource'"))
parts = name.split(".")
response = self._get(UriBuilder(["project", parts[0], "resource", parts[1]]).build()).send()
return response.code == 200
Expand Down
7 changes: 7 additions & 0 deletions tests/test_impl.py
View file
Open in desktop
Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,13 @@ def test_tables(self):
assert "CNSIM.CNSIM1" in tables
assert conn.has_table("CNSIM.CNSIM1")

@pytest.mark.integration
def test_table_variables(self):
conn = self.conn
variables = conn.list_table_variables("CNSIM.CNSIM1")
assert type(variables) is list
assert "LAB_TSC" in [v.get("name") for v in variables]

@pytest.mark.integration
def test_resources(self):
conn = self.conn
Expand Down
Loading
Loading
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all 
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

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feat: added catalog functions#3

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to your account

 Merged

ymarcon
merged 3 commits into

from

Mar 21, 2026
 Merged


feat: added catalog functions
#3
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ffd13a3

feat: catalog functions implemented


ymarcon Feb 23, 2026
89bd8cc

fix: search variables returned type


ymarcon Feb 23, 2026
824d778

chore: code review


ymarcon Mar 21, 2026

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4 changes: 4 additions & 0 deletions
Makefile

View file


Open in desktop

Original file line numberDiff line numberDiff line change
@@ -1,6 +1,10 @@
install:
	uv sync --all-extras

update:
	rm -f uv.lock
	uv sync

test:
	uv run --all-extras pytest

Expand Down

36 changes: 36 additions & 0 deletions
datashield_opal/impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -142,6 +142,10 @@ def __init__(self, name: str, loginInfo: OpalClient.LoginInfo, profile: str = "d
 self.rsession = None
 self.rsession_started = False

 def get_name(self) -> str:
 """Get the name of the connection."""
 return self.name

 def check_user(self) -> bool:
 """Check if the user can authenticate by trying to retrieve the current subject profile."""
 try:
Expand All@@ -165,10 +169,40 @@ def list_tables(self) -> list:
 return names

 def has_table(self, name: str) -> bool:
 # name is in format "datasource.table"
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid table name: {name}. Expected format 'datasource.table'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["datasource", parts[0], "table", parts[1]]).build()).send()
 return response.code == 200

 def list_table_variables(self, table) -> list:
 # table is in format "datasource.table"
 if "." not in table:
 raise OpalDSError(ValueError(f"Invalid table name: {table}. Expected format 'datasource.table'"))
 tokens = table.split(".")
 project_name = tokens[0]
 table_name = tokens[1]
Comment thread
ymarcon marked this conversation as resolved.

 return (
 self
 ._get(UriBuilder(["datasource", project_name, "table", table_name, "variables"]).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_taxonomies(self) -> list:
 return self._get(UriBuilder(["system", "conf", "taxonomies"]).build()).fail_on_error().send().from_json()

 def search_variables(self, query) -> dict:
 return (
 self
 ._get(UriBuilder(["datasources", "variables", "_search"]).query("query", query).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_resources(self) -> list:
 response = self._get("/projects").fail_on_error().send()
 projects = response.from_json()
Expand All@@ -181,6 +215,8 @@ def list_resources(self) -> list:
 return names

 def has_resource(self, name: str) -> bool:
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid resource name: {name}. Expected format 'project.resource'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["project", parts[0], "resource", parts[1]]).build()).send()
 return response.code == 200
Expand Down

7 changes: 7 additions & 0 deletions
tests/test_impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,13 @@ def test_tables(self):
 assert "CNSIM.CNSIM1" in tables
 assert conn.has_table("CNSIM.CNSIM1")

 @pytest.mark.integration
 def test_table_variables(self):
 conn = self.conn
 variables = conn.list_table_variables("CNSIM.CNSIM1")
 assert type(variables) is list
 assert "LAB_TSC" in [v.get("name") for v in variables]

 @pytest.mark.integration
 def test_resources(self):
 conn = self.conn
Expand Down
Loading
Loading

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix");
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
feat: added catalog functions#3

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privacy statement. We’ll occasionally send you account related emails.

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to your account

 Merged

ymarcon
merged 3 commits into

from

Mar 21, 2026
 Merged


feat: added catalog functions
#3
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Select commit
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ffd13a3

feat: catalog functions implemented


ymarcon Feb 23, 2026
89bd8cc

fix: search variables returned type


ymarcon Feb 23, 2026
824d778

chore: code review


ymarcon Mar 21, 2026

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4 changes: 4 additions & 0 deletions
Makefile

View file


Open in desktop

Original file line numberDiff line numberDiff line change
@@ -1,6 +1,10 @@
install:
	uv sync --all-extras

update:
	rm -f uv.lock
	uv sync

test:
	uv run --all-extras pytest

Expand Down

36 changes: 36 additions & 0 deletions
datashield_opal/impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -142,6 +142,10 @@ def __init__(self, name: str, loginInfo: OpalClient.LoginInfo, profile: str = "d
 self.rsession = None
 self.rsession_started = False

 def get_name(self) -> str:
 """Get the name of the connection."""
 return self.name

 def check_user(self) -> bool:
 """Check if the user can authenticate by trying to retrieve the current subject profile."""
 try:
Expand All@@ -165,10 +169,40 @@ def list_tables(self) -> list:
 return names

 def has_table(self, name: str) -> bool:
 # name is in format "datasource.table"
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid table name: {name}. Expected format 'datasource.table'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["datasource", parts[0], "table", parts[1]]).build()).send()
 return response.code == 200

 def list_table_variables(self, table) -> list:
 # table is in format "datasource.table"
 if "." not in table:
 raise OpalDSError(ValueError(f"Invalid table name: {table}. Expected format 'datasource.table'"))
 tokens = table.split(".")
 project_name = tokens[0]
 table_name = tokens[1]
Comment thread
ymarcon marked this conversation as resolved.

 return (
 self
 ._get(UriBuilder(["datasource", project_name, "table", table_name, "variables"]).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_taxonomies(self) -> list:
 return self._get(UriBuilder(["system", "conf", "taxonomies"]).build()).fail_on_error().send().from_json()

 def search_variables(self, query) -> dict:
 return (
 self
 ._get(UriBuilder(["datasources", "variables", "_search"]).query("query", query).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_resources(self) -> list:
 response = self._get("/projects").fail_on_error().send()
 projects = response.from_json()
Expand All@@ -181,6 +215,8 @@ def list_resources(self) -> list:
 return names

 def has_resource(self, name: str) -> bool:
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid resource name: {name}. Expected format 'project.resource'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["project", parts[0], "resource", parts[1]]).build()).send()
 return response.code == 200
Expand Down

7 changes: 7 additions & 0 deletions
tests/test_impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,13 @@ def test_tables(self):
 assert "CNSIM.CNSIM1" in tables
 assert conn.has_table("CNSIM.CNSIM1")

 @pytest.mark.integration
 def test_table_variables(self):
 conn = self.conn
 variables = conn.list_table_variables("CNSIM.CNSIM1")
 assert type(variables) is list
 assert "LAB_TSC" in [v.get("name") for v in variables]

 @pytest.mark.integration
 def test_resources(self):
 conn = self.conn
Expand Down
Loading
Loading

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms");
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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feat: added catalog functions#3

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to your account

 Merged

ymarcon
merged 3 commits into

from

Mar 21, 2026
 Merged


feat: added catalog functions
#3
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ffd13a3

feat: catalog functions implemented


ymarcon Feb 23, 2026
89bd8cc

fix: search variables returned type


ymarcon Feb 23, 2026
824d778

chore: code review


ymarcon Mar 21, 2026

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4 changes: 4 additions & 0 deletions
Makefile

View file


Open in desktop

Original file line numberDiff line numberDiff line change
@@ -1,6 +1,10 @@
install:
	uv sync --all-extras

update:
	rm -f uv.lock
	uv sync

test:
	uv run --all-extras pytest

Expand Down

36 changes: 36 additions & 0 deletions
datashield_opal/impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -142,6 +142,10 @@ def __init__(self, name: str, loginInfo: OpalClient.LoginInfo, profile: str = "d
 self.rsession = None
 self.rsession_started = False

 def get_name(self) -> str:
 """Get the name of the connection."""
 return self.name

 def check_user(self) -> bool:
 """Check if the user can authenticate by trying to retrieve the current subject profile."""
 try:
Expand All@@ -165,10 +169,40 @@ def list_tables(self) -> list:
 return names

 def has_table(self, name: str) -> bool:
 # name is in format "datasource.table"
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid table name: {name}. Expected format 'datasource.table'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["datasource", parts[0], "table", parts[1]]).build()).send()
 return response.code == 200

 def list_table_variables(self, table) -> list:
 # table is in format "datasource.table"
 if "." not in table:
 raise OpalDSError(ValueError(f"Invalid table name: {table}. Expected format 'datasource.table'"))
 tokens = table.split(".")
 project_name = tokens[0]
 table_name = tokens[1]
Comment thread
ymarcon marked this conversation as resolved.

 return (
 self
 ._get(UriBuilder(["datasource", project_name, "table", table_name, "variables"]).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_taxonomies(self) -> list:
 return self._get(UriBuilder(["system", "conf", "taxonomies"]).build()).fail_on_error().send().from_json()

 def search_variables(self, query) -> dict:
 return (
 self
 ._get(UriBuilder(["datasources", "variables", "_search"]).query("query", query).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_resources(self) -> list:
 response = self._get("/projects").fail_on_error().send()
 projects = response.from_json()
Expand All@@ -181,6 +215,8 @@ def list_resources(self) -> list:
 return names

 def has_resource(self, name: str) -> bool:
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid resource name: {name}. Expected format 'project.resource'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["project", parts[0], "resource", parts[1]]).build()).send()
 return response.code == 200
Expand Down

7 changes: 7 additions & 0 deletions
tests/test_impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,13 @@ def test_tables(self):
 assert "CNSIM.CNSIM1" in tables
 assert conn.has_table("CNSIM.CNSIM1")

 @pytest.mark.integration
 def test_table_variables(self):
 conn = self.conn
 variables = conn.list_table_variables("CNSIM.CNSIM1")
 assert type(variables) is list
 assert "LAB_TSC" in [v.get("name") for v in variables]

 @pytest.mark.integration
 def test_resources(self):
 conn = self.conn
Expand Down
Loading
Loading

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links");
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

Skip to content
feat: added catalog functions#3

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

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By clicking “Sign up for GitHub”, you agree to our terms of service and
privacy statement. We’ll occasionally send you account related emails.

Already on GitHub?
Sign in
to your account

 Merged

ymarcon
merged 3 commits into

from

Mar 21, 2026
 Merged


feat: added catalog functions
#3
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 Changes from all commits
Commits

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Select commit
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ffd13a3

feat: catalog functions implemented


ymarcon Feb 23, 2026
89bd8cc

fix: search variables returned type


ymarcon Feb 23, 2026
824d778

chore: code review


ymarcon Mar 21, 2026

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4 changes: 4 additions & 0 deletions
Makefile

View file


Open in desktop

Original file line numberDiff line numberDiff line change
@@ -1,6 +1,10 @@
install:
	uv sync --all-extras

update:
	rm -f uv.lock
	uv sync

test:
	uv run --all-extras pytest

Expand Down

36 changes: 36 additions & 0 deletions
datashield_opal/impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -142,6 +142,10 @@ def __init__(self, name: str, loginInfo: OpalClient.LoginInfo, profile: str = "d
 self.rsession = None
 self.rsession_started = False

 def get_name(self) -> str:
 """Get the name of the connection."""
 return self.name

 def check_user(self) -> bool:
 """Check if the user can authenticate by trying to retrieve the current subject profile."""
 try:
Expand All@@ -165,10 +169,40 @@ def list_tables(self) -> list:
 return names

 def has_table(self, name: str) -> bool:
 # name is in format "datasource.table"
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid table name: {name}. Expected format 'datasource.table'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["datasource", parts[0], "table", parts[1]]).build()).send()
 return response.code == 200

 def list_table_variables(self, table) -> list:
 # table is in format "datasource.table"
 if "." not in table:
 raise OpalDSError(ValueError(f"Invalid table name: {table}. Expected format 'datasource.table'"))
 tokens = table.split(".")
 project_name = tokens[0]
 table_name = tokens[1]
Comment thread
ymarcon marked this conversation as resolved.

 return (
 self
 ._get(UriBuilder(["datasource", project_name, "table", table_name, "variables"]).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_taxonomies(self) -> list:
 return self._get(UriBuilder(["system", "conf", "taxonomies"]).build()).fail_on_error().send().from_json()

 def search_variables(self, query) -> dict:
 return (
 self
 ._get(UriBuilder(["datasources", "variables", "_search"]).query("query", query).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_resources(self) -> list:
 response = self._get("/projects").fail_on_error().send()
 projects = response.from_json()
Expand All@@ -181,6 +215,8 @@ def list_resources(self) -> list:
 return names

 def has_resource(self, name: str) -> bool:
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid resource name: {name}. Expected format 'project.resource'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["project", parts[0], "resource", parts[1]]).build()).send()
 return response.code == 200
Expand Down

7 changes: 7 additions & 0 deletions
tests/test_impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,13 @@ def test_tables(self):
 assert "CNSIM.CNSIM1" in tables
 assert conn.has_table("CNSIM.CNSIM1")

 @pytest.mark.integration
 def test_table_variables(self):
 conn = self.conn
 variables = conn.list_table_variables("CNSIM.CNSIM1")
 assert type(variables) is list
 assert "LAB_TSC" in [v.get("name") for v in variables]

 @pytest.mark.integration
 def test_resources(self):
 conn = self.conn
Expand Down
Loading
Loading

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default");
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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feat: added catalog functions#3

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 Merged

ymarcon
merged 3 commits into

from

Mar 21, 2026
 Merged


feat: added catalog functions
#3
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ffd13a3

feat: catalog functions implemented


ymarcon Feb 23, 2026
89bd8cc

fix: search variables returned type


ymarcon Feb 23, 2026
824d778

chore: code review


ymarcon Mar 21, 2026

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4 changes: 4 additions & 0 deletions
Makefile

View file


Open in desktop

Original file line numberDiff line numberDiff line change
@@ -1,6 +1,10 @@
install:
	uv sync --all-extras

update:
	rm -f uv.lock
	uv sync

test:
	uv run --all-extras pytest

Expand Down

36 changes: 36 additions & 0 deletions
datashield_opal/impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -142,6 +142,10 @@ def __init__(self, name: str, loginInfo: OpalClient.LoginInfo, profile: str = "d
 self.rsession = None
 self.rsession_started = False

 def get_name(self) -> str:
 """Get the name of the connection."""
 return self.name

 def check_user(self) -> bool:
 """Check if the user can authenticate by trying to retrieve the current subject profile."""
 try:
Expand All@@ -165,10 +169,40 @@ def list_tables(self) -> list:
 return names

 def has_table(self, name: str) -> bool:
 # name is in format "datasource.table"
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid table name: {name}. Expected format 'datasource.table'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["datasource", parts[0], "table", parts[1]]).build()).send()
 return response.code == 200

 def list_table_variables(self, table) -> list:
 # table is in format "datasource.table"
 if "." not in table:
 raise OpalDSError(ValueError(f"Invalid table name: {table}. Expected format 'datasource.table'"))
 tokens = table.split(".")
 project_name = tokens[0]
 table_name = tokens[1]
Comment thread
ymarcon marked this conversation as resolved.

 return (
 self
 ._get(UriBuilder(["datasource", project_name, "table", table_name, "variables"]).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_taxonomies(self) -> list:
 return self._get(UriBuilder(["system", "conf", "taxonomies"]).build()).fail_on_error().send().from_json()

 def search_variables(self, query) -> dict:
 return (
 self
 ._get(UriBuilder(["datasources", "variables", "_search"]).query("query", query).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_resources(self) -> list:
 response = self._get("/projects").fail_on_error().send()
 projects = response.from_json()
Expand All@@ -181,6 +215,8 @@ def list_resources(self) -> list:
 return names

 def has_resource(self, name: str) -> bool:
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid resource name: {name}. Expected format 'project.resource'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["project", parts[0], "resource", parts[1]]).build()).send()
 return response.code == 200
Expand Down

7 changes: 7 additions & 0 deletions
tests/test_impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,13 @@ def test_tables(self):
 assert "CNSIM.CNSIM1" in tables
 assert conn.has_table("CNSIM.CNSIM1")

 @pytest.mark.integration
 def test_table_variables(self):
 conn = self.conn
 variables = conn.list_table_variables("CNSIM.CNSIM1")
 assert type(variables) is list
 assert "LAB_TSC" in [v.get("name") for v in variables]

 @pytest.mark.integration
 def test_resources(self):
 conn = self.conn
Expand Down
Loading
Loading

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers");
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
feat: added catalog functions#3

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Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

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privacy statement. We’ll occasionally send you account related emails.

Already on GitHub?
Sign in
to your account

 Merged

ymarcon
merged 3 commits into

from

Mar 21, 2026
 Merged


feat: added catalog functions
#3
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ffd13a3

feat: catalog functions implemented


ymarcon Feb 23, 2026
89bd8cc

fix: search variables returned type


ymarcon Feb 23, 2026
824d778

chore: code review


ymarcon Mar 21, 2026

File filter

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4 changes: 4 additions & 0 deletions
Makefile

View file


Open in desktop

Original file line numberDiff line numberDiff line change
@@ -1,6 +1,10 @@
install:
	uv sync --all-extras

update:
	rm -f uv.lock
	uv sync

test:
	uv run --all-extras pytest

Expand Down

36 changes: 36 additions & 0 deletions
datashield_opal/impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -142,6 +142,10 @@ def __init__(self, name: str, loginInfo: OpalClient.LoginInfo, profile: str = "d
 self.rsession = None
 self.rsession_started = False

 def get_name(self) -> str:
 """Get the name of the connection."""
 return self.name

 def check_user(self) -> bool:
 """Check if the user can authenticate by trying to retrieve the current subject profile."""
 try:
Expand All@@ -165,10 +169,40 @@ def list_tables(self) -> list:
 return names

 def has_table(self, name: str) -> bool:
 # name is in format "datasource.table"
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid table name: {name}. Expected format 'datasource.table'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["datasource", parts[0], "table", parts[1]]).build()).send()
 return response.code == 200

 def list_table_variables(self, table) -> list:
 # table is in format "datasource.table"
 if "." not in table:
 raise OpalDSError(ValueError(f"Invalid table name: {table}. Expected format 'datasource.table'"))
 tokens = table.split(".")
 project_name = tokens[0]
 table_name = tokens[1]
Comment thread
ymarcon marked this conversation as resolved.

 return (
 self
 ._get(UriBuilder(["datasource", project_name, "table", table_name, "variables"]).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_taxonomies(self) -> list:
 return self._get(UriBuilder(["system", "conf", "taxonomies"]).build()).fail_on_error().send().from_json()

 def search_variables(self, query) -> dict:
 return (
 self
 ._get(UriBuilder(["datasources", "variables", "_search"]).query("query", query).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_resources(self) -> list:
 response = self._get("/projects").fail_on_error().send()
 projects = response.from_json()
Expand All@@ -181,6 +215,8 @@ def list_resources(self) -> list:
 return names

 def has_resource(self, name: str) -> bool:
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid resource name: {name}. Expected format 'project.resource'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["project", parts[0], "resource", parts[1]]).build()).send()
 return response.code == 200
Expand Down

7 changes: 7 additions & 0 deletions
tests/test_impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,13 @@ def test_tables(self):
 assert "CNSIM.CNSIM1" in tables
 assert conn.has_table("CNSIM.CNSIM1")

 @pytest.mark.integration
 def test_table_variables(self):
 conn = self.conn
 variables = conn.list_table_variables("CNSIM.CNSIM1")
 assert type(variables) is list
 assert "LAB_TSC" in [v.get("name") for v in variables]

 @pytest.mark.integration
 def test_resources(self):
 conn = self.conn
Expand Down
Loading
Loading

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode");
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();

Skip to content
feat: added catalog functions#3

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

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By clicking “Sign up for GitHub”, you agree to our terms of service and
privacy statement. We’ll occasionally send you account related emails.

Already on GitHub?
Sign in
to your account

 Merged

ymarcon
merged 3 commits into

from

Mar 21, 2026
 Merged


feat: added catalog functions
#3
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 Changes from all commits
Commits

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Select commit
Hold shift + click to select a range
ffd13a3

feat: catalog functions implemented


ymarcon Feb 23, 2026
89bd8cc

fix: search variables returned type


ymarcon Feb 23, 2026
824d778

chore: code review


ymarcon Mar 21, 2026

File filter

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Conversations

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4 changes: 4 additions & 0 deletions
Makefile

View file


Open in desktop

Original file line numberDiff line numberDiff line change
@@ -1,6 +1,10 @@
install:
	uv sync --all-extras

update:
	rm -f uv.lock
	uv sync

test:
	uv run --all-extras pytest

Expand Down

36 changes: 36 additions & 0 deletions
datashield_opal/impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -142,6 +142,10 @@ def __init__(self, name: str, loginInfo: OpalClient.LoginInfo, profile: str = "d
 self.rsession = None
 self.rsession_started = False

 def get_name(self) -> str:
 """Get the name of the connection."""
 return self.name

 def check_user(self) -> bool:
 """Check if the user can authenticate by trying to retrieve the current subject profile."""
 try:
Expand All@@ -165,10 +169,40 @@ def list_tables(self) -> list:
 return names

 def has_table(self, name: str) -> bool:
 # name is in format "datasource.table"
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid table name: {name}. Expected format 'datasource.table'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["datasource", parts[0], "table", parts[1]]).build()).send()
 return response.code == 200

 def list_table_variables(self, table) -> list:
 # table is in format "datasource.table"
 if "." not in table:
 raise OpalDSError(ValueError(f"Invalid table name: {table}. Expected format 'datasource.table'"))
 tokens = table.split(".")
 project_name = tokens[0]
 table_name = tokens[1]
Comment thread
ymarcon marked this conversation as resolved.

 return (
 self
 ._get(UriBuilder(["datasource", project_name, "table", table_name, "variables"]).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_taxonomies(self) -> list:
 return self._get(UriBuilder(["system", "conf", "taxonomies"]).build()).fail_on_error().send().from_json()

 def search_variables(self, query) -> dict:
 return (
 self
 ._get(UriBuilder(["datasources", "variables", "_search"]).query("query", query).build())
 .fail_on_error()
 .send()
 .from_json()
 )
Comment thread
ymarcon marked this conversation as resolved.


 def list_resources(self) -> list:
 response = self._get("/projects").fail_on_error().send()
 projects = response.from_json()
Expand All@@ -181,6 +215,8 @@ def list_resources(self) -> list:
 return names

 def has_resource(self, name: str) -> bool:
 if "." not in name:
 raise OpalDSError(ValueError(f"Invalid resource name: {name}. Expected format 'project.resource'"))
 parts = name.split(".")
 response = self._get(UriBuilder(["project", parts[0], "resource", parts[1]]).build()).send()
 return response.code == 200
Expand Down

7 changes: 7 additions & 0 deletions
tests/test_impl.py

View file


Open in desktop

Original file line numberDiff line numberDiff line change
Expand Up@@ -85,6 +85,13 @@ def test_tables(self):
 assert "CNSIM.CNSIM1" in tables
 assert conn.has_table("CNSIM.CNSIM1")

 @pytest.mark.integration
 def test_table_variables(self):
 conn = self.conn
 variables = conn.list_table_variables("CNSIM.CNSIM1")
 assert type(variables) is list
 assert "LAB_TSC" in [v.get("name") for v in variables]

 @pytest.mark.integration
 def test_resources(self):
 conn = self.conn
Expand Down
Loading
Loading