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  1. CRI-Biocore/Spatial-Transcriptomics-Workshop-2025CRI-Biocore/Spatial-Transcriptomics-Workshop-2025Public

    HTML 4 3

  2. Fiberseq_PacBio_preprocessingFiberseq_PacBio_preprocessingPublic

    Pipeline for Pre-processing for PacBio generated Fiber-seq Data, helps with 5mC and 6mA base modification calling, alignment, phasing and nucleosome calling. This pipeline was designed for the Lab …

    Python

  3. Fiberseq_QCFiberseq_QCPublic

    Snakemake pipeline for Base and functional QC for Fiberseq analysis using PacBio and Nanopore data. This pipeline was designed for the Lab of Sebastian Pott at UC

    Python

  4. Fiberseq_Nanopore_preprocessingFiberseq_Nanopore_preprocessingPublic

    Pipeline for Pre-processing for Nanopore generated Fiber-seq Data, helps with 5mC and 6mA base modification calling, alignment, phasing and nucleosome calling. This pipeline was designed for the La…

    Python

  5. Spatial-Transcriptomics-Workshop-2025Spatial-Transcriptomics-Workshop-2025Public

    Forked from CRI-Biocore/Spatial-Transcriptomics-Workshop-2025

    Spatial Transcriptomics Workshop from the CRI

    HTML

  6. SNAPPSNAPPPublic

    SNAPP sequencing data pipeline - haplotypes from targeted amplicon sequencing

    R 1