dynverse: benchmarking, constructing and interpreting single-cell trajectories

Annotated multivariate observation data in R

Simulating single-cell data using gene regulatory networks 📠

A common data format and inference environment for single-cell trajectories 📦

Common Functionality for the 'dynverse' Packages

Talking to Docker and Singularity containers

A collection of 50+ trajectory inference methods within a common interface 📥📤

Landmark Multi-Dimensional Scaling

Comparison of methods for trajectory inference on single-cell data 🥇