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1. saezlab/ccc_protocolssaezlab/ccc_protocolsPublic

   LIANA x Tensor-cell2cell Protocols

   Jupyter Notebook 5 3

2. LewisLabUCSD/Ligand-Receptor-PairsLewisLabUCSD/Ligand-Receptor-PairsPublic

   Compendium of available lists of ligand-receptor pairs and surface-secreted protein interactions.

   155 35

3. LewisLabUCSD/Celegans-cell2cellLewisLabUCSD/Celegans-cell2cellPublic

   Analyses for cell-cell interactions in C. elegans

   Jupyter Notebook 6 2

4. cell2cellcell2cellPublic

   User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins

   Python 80 20

5. scCellFiescCellFiePublic

   scCellFie infers metabolic activities from single-cell and spatial transcriptomics and offers a variety of downstream analyses.

   Python 62 4

6. DOTpyDOTpyPublic

   Python implementation of DOT, a label transferring tool for spatial transcriptomics

   Python 5 1