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@emdb-empiar

EMDB and EMPIAR

Public archives for 3D structural and imaging data from cryo-EM and related imaging modalities

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  1. ahds ahds Public

    Python package to parse and provide access to headers and data streams in Amira(R) files

    Python 8 2

  2. empiar-depositor empiar-depositor Public

    Python package for depositing into EMPIAR

    Python 7 4

  3. sfftk sfftk Public

    Toolkit for working with EMDB-SFF and other segmentation file formats

    Python 5 3

  4. noid noid Public

    Mint NOIDs using a CLI or API

    Python 5 3

  5. 3dstrudel 3dstrudel Public archive

    Base library of the 3D-STRUDEL project

    Python 3

  6. emdb-xml-translator emdb-xml-translator Public archive

    A set of translators for converting EMDB XML files 1.9 <-> 3.0 <-> 1.9

    Python 2

Repositories

Showing 10 of 31 repositories
  • emdb-empiar/added_annotations's past year of commit activity
    Python 0 Apache-2.0 0 0 9 Updated Sep 1, 2026
  • emdb_schemas Public

    New EMDB schemas repository where versions are organised by tags

    emdb-empiar/emdb_schemas's past year of commit activity
    HTML 0 0 0 0 Updated Jul 31, 2026
  • emdb-chart-builder Public

    EMDB Chart Builder - A standalone charting tool for visualizing EMDB and EMPIAR archive data"

    emdb-empiar/emdb-chart-builder's past year of commit activity
    JavaScript 0 Apache-2.0 0 0 0 Updated Jun 10, 2026
  • emdb-schemas Public

    A collection of emdb.xsd schemas

    emdb-empiar/emdb-schemas's past year of commit activity
    Python 0 0 0 0 Updated Jun 10, 2026
  • emdb-api-wrapper Public

    EMDB API wrapper class

    emdb-empiar/emdb-api-wrapper's past year of commit activity
    Python 1 Apache-2.0 0 3 0 Updated Jun 9, 2026
  • emdb-molstar Public archive Forked from molstar/pdbe-molstar

    Molstar EMDB implementation

    emdb-empiar/emdb-molstar's past year of commit activity
    TypeScript 0 Apache-2.0 37 0 6 Updated Jun 9, 2026
  • SPW Public

    EMPIAR Sample Preparation Collection Schema

    emdb-empiar/SPW's past year of commit activity
    2 0 1 0 Updated Mar 11, 2026
  • empiar-depositor Public

    Python package for depositing into EMPIAR

    emdb-empiar/empiar-depositor's past year of commit activity
    Python 7 Apache-2.0 4 1 2 Updated Mar 9, 2026
  • emdb-json-schemas Public

    JSON Schemas for files describing the EMDB archive

    emdb-empiar/emdb-json-schemas's past year of commit activity
    0 1 0 0 Updated Mar 3, 2026
  • pubmed-author-affiliations Public archive

    Search PubMed for author affiliations of EMDB associated publications

    emdb-empiar/pubmed-author-affiliations's past year of commit activity
    Python 1 1 0 0 Updated Aug 4, 2025

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