ETE Toolkit

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1. ete etePublic

   Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the …

   Python 885 230

2. cookbook cookbookPublic

   HTML 20 9

3. course coursePublic

   Jupyter Notebook 13 9

4. treematcher treematcherPublic

   Search flexible patterns within tree structures using regular expression like syntax.

   Python 10 13

5. pmodeltest pmodeltestPublic

   Python implementation of modeltest/prottest supporting proteins and nucleotides (can be run in parallel).

   Python 6 4

6. ext_apps ext_appsPublic

   A compilation of external software used by ETE

   C 4 6