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Jupyter Notebook 1MIT 0 0 0 Updated Feb 20, 2026

Python code to control automated iterative FISH system

Python 6MIT 0 7 0 Updated Jan 29, 2026

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rna2seg Public

rna2seg

Python 25MIT 2 5 0 Updated May 15, 2025

ComSeg Public

comseg

Python 24MIT 4 6 0 Updated Feb 6, 2025

Jupyter Notebook 1 0 0 0 Updated Feb 28, 2024

Toolbox for the analysis of smFISH images.

Python 78BSD-3-Clause 25 18 2 Updated Oct 31, 2023

Wrapper code for segmentation of cells and nuclei with Cellpose.

Python 2BSD-3-Clause 2 2 1 Updated Jul 19, 2023

ImJoy plugins to run different smFISH analysis in a user-friendly setting.

HTML 4MIT 2 17 0 Updated Mar 8, 2023

Toolbox to simulate smFISH images.

Python 10BSD-3-Clause 1 1 0 Updated Sep 5, 2022

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