More types of small RNA annotation

[Cristinex]

Hi, all,

A silly question. Can mirtrace identify other types of small RNAs besides tRNA, miRNA, rRNA, and artifact? Or why no people use featureCounts to annotate small rna?

Thank you for your reply.

[bounlu]

I am also interested in to know how to quantify other small RNA types. I understand that this requires the corresponding databases to be prepared, but then how to modify the code to take them into consideration in the output reports?

[RJEGR]

Hi,

regarding this observation, I wonder to know how to curate my own db to use it in the flag --custom-db-folder . Any idea how to format it?