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Minor cleanup. - #80

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deflaux merged 2 commits into
googlegenomics:masterfrom
deflaux:master
Jan 7, 2016
Merged

Minor cleanup.#80
deflaux merged 2 commits into
googlegenomics:masterfrom
deflaux:master

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@deflaux

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  1. Fixed all code with warning "local variable definition hides another field or variable", similar to Refactor options. dataflow-java#160
  2. Added more validation to contig command line arg parsing.

to fix all "Field declaration hides another field or variable" warnings.
@dionloy

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LGTM

deflaux added a commit that referenced this pull request Jan 7, 2016
@deflaux
deflaux merged commit c04e4bf into googlegenomics:masterJan 7, 2016
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