Guomics Lab

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1. DIA-BERT DIA-BERTPublic

   DIA-BERT: a pre-trained model for data-independent acquisition mass spectrometry-based proteomics data analysis

   Python 24 10

2. CVDSBA CVDSBAPublic

   Forked from Allen188/CVDSBA

   The project data analysis code

   R 22 23

3. HetuNet HetuNetPublic

   HetuNet: a CNN framework that integrates tissue expansion and orthogonal LCM proteomics with imaging context to reconstruct whole-slide (m×n) spatial protein maps from sparse (m+n) measurements.

   Jupyter Notebook 12 2

4. MassNet-DDA MassNet-DDAPublic

   MassNet-DDA

   Python 11 5

5. DIAtensor DIAtensorPublic

   DIAtensor is software tool to convert mzXML of data-independent acquisition (DIA) mass spectrometry (MS) to DIA tensor.

   7 2

6. TPHP TPHPPublic

   R 6