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@gwlilabmit

Gene-Wei Li Lab

The lab group of Gene-Wei Li at Massachusetts Institute of Technology (Building 68, second floor)

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  1. Ram_Y_complex Ram_Y_complexPublic

    Work accompanying Diverse Primary and Secondary Structural Features Are Associated With Y Complex-Dependent mRNA Maturation in Bacillus subtilis

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  2. Herzel2022_RNAdemographics Herzel2022_RNAdemographicsPublic

    This repository complements the manuscript "Ubiquitous mRNA decay fragments in E. coli redefine the functional transcriptome".

    Shell

  3. rendseq rendseqPublic

    rendseq automates analysis of RendSeq data, right now can automatically identify peaks, more features coming soon!

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  4. UTR_Prediction UTR_PredictionPublic

    Scratch notebooks for the prediction of 5' and 3' UTRs from Rend-seq data

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  5. IGVBrowse IGVBrowsePublic

    A shiny app for browsing data with Rend-Seq

    R

  6. MTC_2023_Scripts MTC_2023_ScriptsPublic

    Collection of analysis scripts for processing raw data and generating figures for the MTC project

    Jupyter Notebook 2

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