hillerlab

Portable solution to generate genome alignment chains using lastz

The core collection of The Hiller Lab nextflow/wdl modules

meta-assemble bulk RNAseq datasets at scale

GPU-accelerated high-scoring ungapped alignment pair backend

comprehensive prediction of open-reading-frames

A compendium of The Hiller Lab containers/Dockerfiles

Remove chain-breaking alignments using chain/net files

TOGA2: A faster, more versatile successor of Tool to infer Orthologs from Genome Alignments

Gene expression quantification pipeline based on kb-python compatible with TOGA2 output structure

CBQ-native all-in-one quality control tool