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hrlai/README.md

Hi mate; Kia ora; Apa khabar; 你好，吃飽了嗎 👋

I'm a forest and quantitative ecologist aiming to build capacity in Tropical Asia with open data and software. I enjoy being at the crossroad between natural history and statistical modelling.

  • 🔭 I’m currently working on the Virtual Ecosystem, trait-based ecology, plant demography and forest regeneration
  • 👯 I’m looking to foster a collaborative network in Tropical Ecology, particularly in Malaysia and the SE Asian region
  • 🌱 I’m looking for help with building a Trait Ecology Initiative in SE Asia, backed by the trait databases for the flora of Malaysia and Singapore (and growing)
  • 💻 I’m also looking for buddies to building capacity in statistical programming with R in Malaysia
  • 🔍 I'm learning to identify tropical plant species

Pinned Loading

  1. ImperialCollegeLondon/virtual_ecosystemImperialCollegeLondon/virtual_ecosystemPublic

    This repository is the home for the codebase for the Virtual Ecosystem project.

    Python 20 5

  2. ImperialCollegeLondon/ve_data_scienceImperialCollegeLondon/ve_data_sciencePublic

    This repository is the data science repository for the Virtual Ecosystem project. It is used to store all the research and analysis being used to parameterise and run the Virtual Ecosystem model.

    R 4

  3. novelforestSGnovelforestSGPublic

    Data and model from the novel forests of Singapore

    R 3 2

  4. SGtraitsSGtraitsPublic

    R 1

  5. model_based_phenologymodel_based_phenologyPublic

    Model-based ordination for phenological studies: From controlling sampling bias to inferring temporal associations

    TeX

  6. greta-dev/greta.distributionsgreta-dev/greta.distributionsPublic

    Extends the distributions offered in greta

    R 1 2

, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all 
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(function() {
function addCopyButtons() {
document.querySelectorAll('pre code').forEach(function(codeBlock) {
if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;
codeBlock.parentElement.setAttribute('data-copy-added', 'true');
var btn = document.createElement('button');
btn.textContent = 'Copy';
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btn.onmouseover = function() { this.style.opacity = '1'; };
btn.onmouseout = function() { this.style.opacity = '0.7'; };
btn.onclick = function() {
navigator.clipboard.writeText(codeBlock.textContent).then(function() {
btn.textContent = 'Copied!';
setTimeout(function() { btn.textContent = 'Copy'; }, 1500);
});
};
codeBlock.parentElement.style.position = 'relative';
codeBlock.parentElement.appendChild(btn);
});
}
addCopyButtons();
// Re-run on dynamic content
var observer = new MutationObserver(addCopyButtons);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

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hrlai/README.md
Hi mate; Kia ora; Apa khabar; 你好，吃飽了嗎 👋
I'm a forest and quantitative ecologist aiming to build capacity in Tropical Asia with open data and software. I enjoy being at the crossroad between natural history and statistical modelling.
  • 🔭 I’m currently working on the Virtual Ecosystem, trait-based ecology, plant demography and forest regeneration
  • 👯 I’m looking to foster a collaborative network in Tropical Ecology, particularly in Malaysia and the SE Asian region
  • 🌱 I’m looking for help with building a Trait Ecology Initiative in SE Asia, backed by the trait databases for the flora of Malaysia and Singapore (and growing)
  • 💻 I’m also looking for buddies to building capacity in statistical programming with R in Malaysia
  • 🔍 I'm learning to identify tropical plant species

Pinned
Loading
  1. ImperialCollegeLondon/virtual_ecosystemImperialCollegeLondon/virtual_ecosystemPublic
    
This repository is the home for the codebase for the Virtual Ecosystem project.

    Python
20

5

  2. ImperialCollegeLondon/ve_data_scienceImperialCollegeLondon/ve_data_sciencePublic
    
This repository is the data science repository for the Virtual Ecosystem project. It is used to store all the research and analysis being used to parameterise and run the Virtual Ecosystem model.

    R
4

  3. novelforestSGnovelforestSGPublic
    
Data and model from the novel forests of Singapore

    R
3

2

  4. SGtraitsSGtraitsPublic
    R
1

  5. model_based_phenologymodel_based_phenologyPublic
    
Model-based ordination for phenological studies: From controlling sampling bias to inferring temporal associations

    TeX
  6. greta-dev/greta.distributionsgreta-dev/greta.distributionsPublic
    
Extends the distributions offered in greta

    R
1

2


, 'i');
if (__m === '*' || __re.test(location.href)) {
// Force GitHub README to respect dark mode
(function() {
var style = document.createElement('style');
style.textContent = '
.markdown-body {
color-scheme: dark light;
}
.markdown-body pre { background: #161b22 !important; }
.markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }
.markdown-body table th, .markdown-body table td { border-color: #30363d !important; }
.markdown-body img { background: #0d1117; }
.markdown-body blockquote { border-left-color: #8b949e; }
.markdown-body hr { border-color: #30363d; }
';
document.head.appendChild(style);
})();
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
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Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
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hrlai/README.md
Hi mate; Kia ora; Apa khabar; 你好，吃飽了嗎 👋
I'm a forest and quantitative ecologist aiming to build capacity in Tropical Asia with open data and software. I enjoy being at the crossroad between natural history and statistical modelling.
  • 🔭 I’m currently working on the Virtual Ecosystem, trait-based ecology, plant demography and forest regeneration
  • 👯 I’m looking to foster a collaborative network in Tropical Ecology, particularly in Malaysia and the SE Asian region
  • 🌱 I’m looking for help with building a Trait Ecology Initiative in SE Asia, backed by the trait databases for the flora of Malaysia and Singapore (and growing)
  • 💻 I’m also looking for buddies to building capacity in statistical programming with R in Malaysia
  • 🔍 I'm learning to identify tropical plant species

Pinned
Loading
  1. ImperialCollegeLondon/virtual_ecosystemImperialCollegeLondon/virtual_ecosystemPublic
    
This repository is the home for the codebase for the Virtual Ecosystem project.

    Python
20

5

  2. ImperialCollegeLondon/ve_data_scienceImperialCollegeLondon/ve_data_sciencePublic
    
This repository is the data science repository for the Virtual Ecosystem project. It is used to store all the research and analysis being used to parameterise and run the Virtual Ecosystem model.

    R
4

  3. novelforestSGnovelforestSGPublic
    
Data and model from the novel forests of Singapore

    R
3

2

  4. SGtraitsSGtraitsPublic
    R
1

  5. model_based_phenologymodel_based_phenologyPublic
    
Model-based ordination for phenological studies: From controlling sampling bias to inferring temporal associations

    TeX
  6. greta-dev/greta.distributionsgreta-dev/greta.distributionsPublic
    
Extends the distributions offered in greta

    R
1

2


, 'i');
if (__m === '*' || __re.test(location.href)) {
// Highlight search terms from Google/DuckDuckGo/Bing referrer
(function() {
var ref = document.referrer;
var terms = [];
if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {
var url = new URL(ref);
var q = url.searchParams.get('q') || url.searchParams.get('p');
if (q) {
terms = q.split(/\s+/).filter(function(t) { return t.length > 2; });
}
}
if (terms.length === 0) return;
var style = document.createElement('style');
style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';
document.head.appendChild(style);
function highlight(node) {
if (node.nodeType === 3) { // text node
var text = node.textContent;
var found = false;
terms.forEach(function(term) {
var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\]\\]/g, '\\') + ')', 'gi');
if (regex.test(text)) {
found = true;
var frag = document.createDocumentFragment();
var parts = text.split(regex);
parts.forEach(function(part, i) {
if (i % 2 === 0) {
frag.appendChild(document.createTextNode(part));
} else {
var span = document.createElement('span');
span.className = 'userscript-highlight';
span.textContent = part;
frag.appendChild(span);
}
});
node.parentNode.replaceChild(frag, node);
}
});
} else if (node.nodeType === 1 && node.childNodes) { // element
var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];
if (!skipTags.includes(node.tagName)) {
Array.from(node.childNodes).forEach(highlight);
}
}
}
highlight(document.body);
// Re-highlight on dynamic content
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1 || node.nodeType === 3) highlight(node);
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
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Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
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hrlai/README.md
Hi mate; Kia ora; Apa khabar; 你好，吃飽了嗎 👋
I'm a forest and quantitative ecologist aiming to build capacity in Tropical Asia with open data and software. I enjoy being at the crossroad between natural history and statistical modelling.
  • 🔭 I’m currently working on the Virtual Ecosystem, trait-based ecology, plant demography and forest regeneration
  • 👯 I’m looking to foster a collaborative network in Tropical Ecology, particularly in Malaysia and the SE Asian region
  • 🌱 I’m looking for help with building a Trait Ecology Initiative in SE Asia, backed by the trait databases for the flora of Malaysia and Singapore (and growing)
  • 💻 I’m also looking for buddies to building capacity in statistical programming with R in Malaysia
  • 🔍 I'm learning to identify tropical plant species

Pinned
Loading
  1. ImperialCollegeLondon/virtual_ecosystemImperialCollegeLondon/virtual_ecosystemPublic
    
This repository is the home for the codebase for the Virtual Ecosystem project.

    Python
20

5

  2. ImperialCollegeLondon/ve_data_scienceImperialCollegeLondon/ve_data_sciencePublic
    
This repository is the data science repository for the Virtual Ecosystem project. It is used to store all the research and analysis being used to parameterise and run the Virtual Ecosystem model.

    R
4

  3. novelforestSGnovelforestSGPublic
    
Data and model from the novel forests of Singapore

    R
3

2

  4. SGtraitsSGtraitsPublic
    R
1

  5. model_based_phenologymodel_based_phenologyPublic
    
Model-based ordination for phenological studies: From controlling sampling bias to inferring temporal associations

    TeX
  6. greta-dev/greta.distributionsgreta-dev/greta.distributionsPublic
    
Extends the distributions offered in greta

    R
1

2


, 'i');
if (__m === '*' || __re.test(location.href)) {
// Strip utm_, fbclid, gclid, etc. from all links on page
(function() {
var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',
'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',
'ref', 'ref_src', 'source', 'medium', 'campaign'];
function cleanUrl(url) {
try {
var u = new URL(url, window.location.origin);
var changed = false;
trackingParams.forEach(function(p) {
if (u.searchParams.has(p)) {
u.searchParams.delete(p);
changed = true;
}
});
return changed ? u.toString() : url;
} catch (e) {
return url;
}
}
function cleanLinks() {
document.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
cleanLinks();
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1) {
if (node.tagName === 'A') cleanLinks();
node.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

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25
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 · 92
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Achievements
Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
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Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
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hrlai/README.md
Hi mate; Kia ora; Apa khabar; 你好，吃飽了嗎 👋
I'm a forest and quantitative ecologist aiming to build capacity in Tropical Asia with open data and software. I enjoy being at the crossroad between natural history and statistical modelling.
  • 🔭 I’m currently working on the Virtual Ecosystem, trait-based ecology, plant demography and forest regeneration
  • 👯 I’m looking to foster a collaborative network in Tropical Ecology, particularly in Malaysia and the SE Asian region
  • 🌱 I’m looking for help with building a Trait Ecology Initiative in SE Asia, backed by the trait databases for the flora of Malaysia and Singapore (and growing)
  • 💻 I’m also looking for buddies to building capacity in statistical programming with R in Malaysia
  • 🔍 I'm learning to identify tropical plant species

Pinned
Loading
  1. ImperialCollegeLondon/virtual_ecosystemImperialCollegeLondon/virtual_ecosystemPublic
    
This repository is the home for the codebase for the Virtual Ecosystem project.

    Python
20

5

  2. ImperialCollegeLondon/ve_data_scienceImperialCollegeLondon/ve_data_sciencePublic
    
This repository is the data science repository for the Virtual Ecosystem project. It is used to store all the research and analysis being used to parameterise and run the Virtual Ecosystem model.

    R
4

  3. novelforestSGnovelforestSGPublic
    
Data and model from the novel forests of Singapore

    R
3

2

  4. SGtraitsSGtraitsPublic
    R
1

  5. model_based_phenologymodel_based_phenologyPublic
    
Model-based ordination for phenological studies: From controlling sampling bias to inferring temporal associations

    TeX
  6. greta-dev/greta.distributionsgreta-dev/greta.distributionsPublic
    
Extends the distributions offered in greta

    R
1

2


, 'i');
if (__m === '*' || __re.test(location.href)) {
// Auto-enable theater mode on YouTube
(function() {
function tryTheater() {
var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]');
if (btn && !btn.classList.contains('activated')) {
btn.click();
}
}
// Try immediately
tryTheater();
// Try after navigation (SPA)
var lastUrl = location.href;
setInterval(function() {
if (location.href !== lastUrl) {
lastUrl = location.href;
setTimeout(tryTheater, 500);
}
}, 1000);
// Also try on player load
var observer = new MutationObserver(tryTheater);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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Open the portbay door, please
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25
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 · 92
following

Achievements
Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
Achievements
Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
Organizations
@stoufferlab

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hrlai/README.md
Hi mate; Kia ora; Apa khabar; 你好，吃飽了嗎 👋
I'm a forest and quantitative ecologist aiming to build capacity in Tropical Asia with open data and software. I enjoy being at the crossroad between natural history and statistical modelling.
  • 🔭 I’m currently working on the Virtual Ecosystem, trait-based ecology, plant demography and forest regeneration
  • 👯 I’m looking to foster a collaborative network in Tropical Ecology, particularly in Malaysia and the SE Asian region
  • 🌱 I’m looking for help with building a Trait Ecology Initiative in SE Asia, backed by the trait databases for the flora of Malaysia and Singapore (and growing)
  • 💻 I’m also looking for buddies to building capacity in statistical programming with R in Malaysia
  • 🔍 I'm learning to identify tropical plant species

Pinned
Loading
  1. ImperialCollegeLondon/virtual_ecosystemImperialCollegeLondon/virtual_ecosystemPublic
    
This repository is the home for the codebase for the Virtual Ecosystem project.

    Python
20

5

  2. ImperialCollegeLondon/ve_data_scienceImperialCollegeLondon/ve_data_sciencePublic
    
This repository is the data science repository for the Virtual Ecosystem project. It is used to store all the research and analysis being used to parameterise and run the Virtual Ecosystem model.

    R
4

  3. novelforestSGnovelforestSGPublic
    
Data and model from the novel forests of Singapore

    R
3

2

  4. SGtraitsSGtraitsPublic
    R
1

  5. model_based_phenologymodel_based_phenologyPublic
    
Model-based ordination for phenological studies: From controlling sampling bias to inferring temporal associations

    TeX
  6. greta-dev/greta.distributionsgreta-dev/greta.distributionsPublic
    
Extends the distributions offered in greta

    R
1

2


, 'i');
if (__m === '*' || __re.test(location.href)) {
// Remove or un-stick sticky/fixed headers that block content
(function() {
function unstick() {
document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) {
if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {
el.style.position = 'static';
el.style.top = 'auto';
el.style.zIndex = 'auto';
}
});
}
unstick();
var observer = new MutationObserver(unstick);
observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });
})();
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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Open the portbay door, please
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25
followers
 · 92
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Achievements
Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
Achievements
Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
Organizations
@stoufferlab

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hrlai/README.md
Hi mate; Kia ora; Apa khabar; 你好，吃飽了嗎 👋
I'm a forest and quantitative ecologist aiming to build capacity in Tropical Asia with open data and software. I enjoy being at the crossroad between natural history and statistical modelling.
  • 🔭 I’m currently working on the Virtual Ecosystem, trait-based ecology, plant demography and forest regeneration
  • 👯 I’m looking to foster a collaborative network in Tropical Ecology, particularly in Malaysia and the SE Asian region
  • 🌱 I’m looking for help with building a Trait Ecology Initiative in SE Asia, backed by the trait databases for the flora of Malaysia and Singapore (and growing)
  • 💻 I’m also looking for buddies to building capacity in statistical programming with R in Malaysia
  • 🔍 I'm learning to identify tropical plant species

Pinned
Loading
  1. ImperialCollegeLondon/virtual_ecosystemImperialCollegeLondon/virtual_ecosystemPublic
    
This repository is the home for the codebase for the Virtual Ecosystem project.

    Python
20

5

  2. ImperialCollegeLondon/ve_data_scienceImperialCollegeLondon/ve_data_sciencePublic
    
This repository is the data science repository for the Virtual Ecosystem project. It is used to store all the research and analysis being used to parameterise and run the Virtual Ecosystem model.

    R
4

  3. novelforestSGnovelforestSGPublic
    
Data and model from the novel forests of Singapore

    R
3

2

  4. SGtraitsSGtraitsPublic
    R
1

  5. model_based_phenologymodel_based_phenologyPublic
    
Model-based ordination for phenological studies: From controlling sampling bias to inferring temporal associations

    TeX
  6. greta-dev/greta.distributionsgreta-dev/greta.distributionsPublic
    
Extends the distributions offered in greta

    R
1

2


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Open the portbay door, please
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Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
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Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Arctic Code Vault Contributor
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@stoufferlab

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hrlai/README.md
Hi mate; Kia ora; Apa khabar; 你好，吃飽了嗎 👋
I'm a forest and quantitative ecologist aiming to build capacity in Tropical Asia with open data and software. I enjoy being at the crossroad between natural history and statistical modelling.
  • 🔭 I’m currently working on the Virtual Ecosystem, trait-based ecology, plant demography and forest regeneration
  • 👯 I’m looking to foster a collaborative network in Tropical Ecology, particularly in Malaysia and the SE Asian region
  • 🌱 I’m looking for help with building a Trait Ecology Initiative in SE Asia, backed by the trait databases for the flora of Malaysia and Singapore (and growing)
  • 💻 I’m also looking for buddies to building capacity in statistical programming with R in Malaysia
  • 🔍 I'm learning to identify tropical plant species

Pinned
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  1. ImperialCollegeLondon/virtual_ecosystemImperialCollegeLondon/virtual_ecosystemPublic
    
This repository is the home for the codebase for the Virtual Ecosystem project.

    Python
20

5

  2. ImperialCollegeLondon/ve_data_scienceImperialCollegeLondon/ve_data_sciencePublic
    
This repository is the data science repository for the Virtual Ecosystem project. It is used to store all the research and analysis being used to parameterise and run the Virtual Ecosystem model.

    R
4

  3. novelforestSGnovelforestSGPublic
    
Data and model from the novel forests of Singapore

    R
3

2

  4. SGtraitsSGtraitsPublic
    R
1

  5. model_based_phenologymodel_based_phenologyPublic
    
Model-based ordination for phenological studies: From controlling sampling bias to inferring temporal associations

    TeX
  6. greta-dev/greta.distributionsgreta-dev/greta.distributionsPublic
    
Extends the distributions offered in greta

    R
1

2