ICBI

Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.

A computational protocol for atlas-level data integration and analysis as performed in Salcher et al. (2022).

Analysis of mast cells in public breast cancer cohorts

NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.

Single-cell analysis of Hairy Cell Leukemia samples published in Bohn et al.

Escherichia-Shigella Expansion and metabolite dysregulation in type 3c diabetes: linking microbiome alterations to exocrine pancreatic insufficiency

For now, redirect to ICBI website.

Single-cell Colorectal Cancer Atlas with 4.27M cells