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Intermine gene search iOS

The InterMine app allows you to search through integrated genomics data-sets at a variety of model-organism databases. Use structured search templates to find relationships between different data sets, inspect your lists of genes of interest and use them in further data analysis and find items of interest from a range of searches on your iPhone.

How to run the project?

  1. Download Xcode
  2. Clone the project from Github:
git clone https://github.com/joystate/intermine-ios.git
  1. Build and run project in Xcode

Architecture

The application is build following MVVM pattern. The following logical parts are present in the application:

  1. Models. There are two types of models - CoreData models (representing mine, mine model and saved search objects) and view models (providing UI elements for search results, lists and templates)
  2. Views. The main storyboard contains all view controllers and major UI elements. Navigation between view controllers is written in code with animated transitions when appropriate.
  3. Controllers. The main controller is tab bar controller. Navigation controllers are used to achieve the navigation inside the tabs.
  4. Networking module is build using Alamofire library. IntermineAPIClient performs network requests.

How to contribute?

To contribute to Intermine iOS app, one can do the following:

  1. Write tests. All modules of the app need tests, including all application models and layers. Writing tests is the best place to start for a new contributor, as it allows to get familiar with the codebase.
  2. Refactoring. Chasing perfection leads to better understanding of the codebase and makes the code more maintainable and clean.
  3. Github issues. Issues are written by developers of the application for the developers working on the application. Most likely, a new contributor will have trouble understanding the problem described in any particular issue. Try to get familiar with the codebase and contact one of the developers for more details.

Dependencies

(All dependencies are already installed in the project repo)

About

Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina

Topics

genomicsgoogle-summer-of-codeintermineios

Resources

Readme
Activity
Custom properties

Stars

2 stars

Watchers

9 watching

Forks

1 fork
Report repository

Releases

Packages

Contributors

Languages

, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all 
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(function() {
function addCopyButtons() {
document.querySelectorAll('pre code').forEach(function(codeBlock) {
if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;
codeBlock.parentElement.setAttribute('data-copy-added', 'true');
var btn = document.createElement('button');
btn.textContent = 'Copy';
btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';
btn.onmouseover = function() { this.style.opacity = '1'; };
btn.onmouseout = function() { this.style.opacity = '0.7'; };
btn.onclick = function() {
navigator.clipboard.writeText(codeBlock.textContent).then(function() {
btn.textContent = 'Copied!';
setTimeout(function() { btn.textContent = 'Copy'; }, 1500);
});
};
codeBlock.parentElement.style.position = 'relative';
codeBlock.parentElement.appendChild(btn);
});
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addCopyButtons();
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var observer = new MutationObserver(addCopyButtons);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
GitHub - intermine/intermine-ios: Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina · GitHub
Skip to content
BranchesTags
Repository files navigation
Intermine gene search iOS
The InterMine app allows you to search through integrated genomics data-sets at a variety of model-organism databases. Use structured search templates to find relationships between different data sets, inspect your lists of genes of interest and use them in further data analysis and find items of interest from a range of searches on your iPhone.
How to run the project?
  1. Download Xcode
  2. Clone the project from Github:
git clone https://github.com/joystate/intermine-ios.git
  1. Build and run project in Xcode
Architecture
The application is build following MVVM pattern. The following logical parts are present in the application:
  1. Models. There are two types of models - CoreData models (representing mine, mine model and saved search objects) and view models (providing UI elements for search results, lists and templates)
  2. Views. The main storyboard contains all view controllers and major UI elements. Navigation between view controllers is written in code with animated transitions when appropriate.
  3. Controllers. The main controller is tab bar controller. Navigation controllers are used to achieve the navigation inside the tabs.
  4. Networking module is build using Alamofire library. IntermineAPIClient performs network requests.
How to contribute?
To contribute to Intermine iOS app, one can do the following:
  1. Write tests. All modules of the app need tests, including all application models and layers. Writing tests is the best place to start for a new contributor, as it allows to get familiar with the codebase.
  2. Refactoring. Chasing perfection leads to better understanding of the codebase and makes the code more maintainable and clean.
  3. Github issues. Issues are written by developers of the application for the developers working on the application. Most likely, a new contributor will have trouble understanding the problem described in any particular issue. Try to get familiar with the codebase and contact one of the developers for more details.
Dependencies
(All dependencies are already installed in the project repo)
About
Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina
Topics
genomicsgoogle-summer-of-codeintermineios
Resources
Readme
Activity
Custom properties
Stars
2 stars
Watchers
9 watching
Forks
1 fork
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Force GitHub README to respect dark mode
(function() {
var style = document.createElement('style');
style.textContent = '
.markdown-body {
color-scheme: dark light;
}
.markdown-body pre { background: #161b22 !important; }
.markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }
.markdown-body table th, .markdown-body table td { border-color: #30363d !important; }
.markdown-body img { background: #0d1117; }
.markdown-body blockquote { border-left-color: #8b949e; }
.markdown-body hr { border-color: #30363d; }
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document.head.appendChild(style);
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}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
GitHub - intermine/intermine-ios: Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina · GitHub
Skip to content
BranchesTags
Repository files navigation
Intermine gene search iOS
The InterMine app allows you to search through integrated genomics data-sets at a variety of model-organism databases. Use structured search templates to find relationships between different data sets, inspect your lists of genes of interest and use them in further data analysis and find items of interest from a range of searches on your iPhone.
How to run the project?
  1. Download Xcode
  2. Clone the project from Github:
git clone https://github.com/joystate/intermine-ios.git
  1. Build and run project in Xcode
Architecture
The application is build following MVVM pattern. The following logical parts are present in the application:
  1. Models. There are two types of models - CoreData models (representing mine, mine model and saved search objects) and view models (providing UI elements for search results, lists and templates)
  2. Views. The main storyboard contains all view controllers and major UI elements. Navigation between view controllers is written in code with animated transitions when appropriate.
  3. Controllers. The main controller is tab bar controller. Navigation controllers are used to achieve the navigation inside the tabs.
  4. Networking module is build using Alamofire library. IntermineAPIClient performs network requests.
How to contribute?
To contribute to Intermine iOS app, one can do the following:
  1. Write tests. All modules of the app need tests, including all application models and layers. Writing tests is the best place to start for a new contributor, as it allows to get familiar with the codebase.
  2. Refactoring. Chasing perfection leads to better understanding of the codebase and makes the code more maintainable and clean.
  3. Github issues. Issues are written by developers of the application for the developers working on the application. Most likely, a new contributor will have trouble understanding the problem described in any particular issue. Try to get familiar with the codebase and contact one of the developers for more details.
Dependencies
(All dependencies are already installed in the project repo)
About
Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina
Topics
genomicsgoogle-summer-of-codeintermineios
Resources
Readme
Activity
Custom properties
Stars
2 stars
Watchers
9 watching
Forks
1 fork
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Highlight search terms from Google/DuckDuckGo/Bing referrer
(function() {
var ref = document.referrer;
var terms = [];
if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {
var url = new URL(ref);
var q = url.searchParams.get('q') || url.searchParams.get('p');
if (q) {
terms = q.split(/\s+/).filter(function(t) { return t.length > 2; });
}
}
if (terms.length === 0) return;
var style = document.createElement('style');
style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';
document.head.appendChild(style);
function highlight(node) {
if (node.nodeType === 3) { // text node
var text = node.textContent;
var found = false;
terms.forEach(function(term) {
var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\]\\]/g, '\\') + ')', 'gi');
if (regex.test(text)) {
found = true;
var frag = document.createDocumentFragment();
var parts = text.split(regex);
parts.forEach(function(part, i) {
if (i % 2 === 0) {
frag.appendChild(document.createTextNode(part));
} else {
var span = document.createElement('span');
span.className = 'userscript-highlight';
span.textContent = part;
frag.appendChild(span);
}
});
node.parentNode.replaceChild(frag, node);
}
});
} else if (node.nodeType === 1 && node.childNodes) { // element
var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];
if (!skipTags.includes(node.tagName)) {
Array.from(node.childNodes).forEach(highlight);
}
}
}
highlight(document.body);
// Re-highlight on dynamic content
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1 || node.nodeType === 3) highlight(node);
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
GitHub - intermine/intermine-ios: Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina · GitHub
Skip to content
BranchesTags
Repository files navigation
Intermine gene search iOS
The InterMine app allows you to search through integrated genomics data-sets at a variety of model-organism databases. Use structured search templates to find relationships between different data sets, inspect your lists of genes of interest and use them in further data analysis and find items of interest from a range of searches on your iPhone.
How to run the project?
  1. Download Xcode
  2. Clone the project from Github:
git clone https://github.com/joystate/intermine-ios.git
  1. Build and run project in Xcode
Architecture
The application is build following MVVM pattern. The following logical parts are present in the application:
  1. Models. There are two types of models - CoreData models (representing mine, mine model and saved search objects) and view models (providing UI elements for search results, lists and templates)
  2. Views. The main storyboard contains all view controllers and major UI elements. Navigation between view controllers is written in code with animated transitions when appropriate.
  3. Controllers. The main controller is tab bar controller. Navigation controllers are used to achieve the navigation inside the tabs.
  4. Networking module is build using Alamofire library. IntermineAPIClient performs network requests.
How to contribute?
To contribute to Intermine iOS app, one can do the following:
  1. Write tests. All modules of the app need tests, including all application models and layers. Writing tests is the best place to start for a new contributor, as it allows to get familiar with the codebase.
  2. Refactoring. Chasing perfection leads to better understanding of the codebase and makes the code more maintainable and clean.
  3. Github issues. Issues are written by developers of the application for the developers working on the application. Most likely, a new contributor will have trouble understanding the problem described in any particular issue. Try to get familiar with the codebase and contact one of the developers for more details.
Dependencies
(All dependencies are already installed in the project repo)
About
Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina
Topics
genomicsgoogle-summer-of-codeintermineios
Resources
Readme
Activity
Custom properties
Stars
2 stars
Watchers
9 watching
Forks
1 fork
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Strip utm_, fbclid, gclid, etc. from all links on page
(function() {
var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',
'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',
'ref', 'ref_src', 'source', 'medium', 'campaign'];
function cleanUrl(url) {
try {
var u = new URL(url, window.location.origin);
var changed = false;
trackingParams.forEach(function(p) {
if (u.searchParams.has(p)) {
u.searchParams.delete(p);
changed = true;
}
});
return changed ? u.toString() : url;
} catch (e) {
return url;
}
}
function cleanLinks() {
document.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
cleanLinks();
var observer = new MutationObserver(function(mutations) {
mutations.forEach(function(m) {
m.addedNodes.forEach(function(node) {
if (node.nodeType === 1) {
if (node.tagName === 'A') cleanLinks();
node.querySelectorAll('a[href]').forEach(function(a) {
var clean = cleanUrl(a.href);
if (clean !== a.href) a.href = clean;
});
}
});
});
});
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '
GitHub - intermine/intermine-ios: Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina · GitHub
Skip to content
BranchesTags
Repository files navigation
Intermine gene search iOS
The InterMine app allows you to search through integrated genomics data-sets at a variety of model-organism databases. Use structured search templates to find relationships between different data sets, inspect your lists of genes of interest and use them in further data analysis and find items of interest from a range of searches on your iPhone.
How to run the project?
  1. Download Xcode
  2. Clone the project from Github:
git clone https://github.com/joystate/intermine-ios.git
  1. Build and run project in Xcode
Architecture
The application is build following MVVM pattern. The following logical parts are present in the application:
  1. Models. There are two types of models - CoreData models (representing mine, mine model and saved search objects) and view models (providing UI elements for search results, lists and templates)
  2. Views. The main storyboard contains all view controllers and major UI elements. Navigation between view controllers is written in code with animated transitions when appropriate.
  3. Controllers. The main controller is tab bar controller. Navigation controllers are used to achieve the navigation inside the tabs.
  4. Networking module is build using Alamofire library. IntermineAPIClient performs network requests.
How to contribute?
To contribute to Intermine iOS app, one can do the following:
  1. Write tests. All modules of the app need tests, including all application models and layers. Writing tests is the best place to start for a new contributor, as it allows to get familiar with the codebase.
  2. Refactoring. Chasing perfection leads to better understanding of the codebase and makes the code more maintainable and clean.
  3. Github issues. Issues are written by developers of the application for the developers working on the application. Most likely, a new contributor will have trouble understanding the problem described in any particular issue. Try to get familiar with the codebase and contact one of the developers for more details.
Dependencies
(All dependencies are already installed in the project repo)
About
Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina
Topics
genomicsgoogle-summer-of-codeintermineios
Resources
Readme
Activity
Custom properties
Stars
2 stars
Watchers
9 watching
Forks
1 fork
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Auto-enable theater mode on YouTube
(function() {
function tryTheater() {
var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]');
if (btn && !btn.classList.contains('activated')) {
btn.click();
}
}
// Try immediately
tryTheater();
// Try after navigation (SPA)
var lastUrl = location.href;
setInterval(function() {
if (location.href !== lastUrl) {
lastUrl = location.href;
setTimeout(tryTheater, 500);
}
}, 1000);
// Also try on player load
var observer = new MutationObserver(tryTheater);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
GitHub - intermine/intermine-ios: Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina · GitHub
Skip to content
BranchesTags
Repository files navigation
Intermine gene search iOS
The InterMine app allows you to search through integrated genomics data-sets at a variety of model-organism databases. Use structured search templates to find relationships between different data sets, inspect your lists of genes of interest and use them in further data analysis and find items of interest from a range of searches on your iPhone.
How to run the project?
  1. Download Xcode
  2. Clone the project from Github:
git clone https://github.com/joystate/intermine-ios.git
  1. Build and run project in Xcode
Architecture
The application is build following MVVM pattern. The following logical parts are present in the application:
  1. Models. There are two types of models - CoreData models (representing mine, mine model and saved search objects) and view models (providing UI elements for search results, lists and templates)
  2. Views. The main storyboard contains all view controllers and major UI elements. Navigation between view controllers is written in code with animated transitions when appropriate.
  3. Controllers. The main controller is tab bar controller. Navigation controllers are used to achieve the navigation inside the tabs.
  4. Networking module is build using Alamofire library. IntermineAPIClient performs network requests.
How to contribute?
To contribute to Intermine iOS app, one can do the following:
  1. Write tests. All modules of the app need tests, including all application models and layers. Writing tests is the best place to start for a new contributor, as it allows to get familiar with the codebase.
  2. Refactoring. Chasing perfection leads to better understanding of the codebase and makes the code more maintainable and clean.
  3. Github issues. Issues are written by developers of the application for the developers working on the application. Most likely, a new contributor will have trouble understanding the problem described in any particular issue. Try to get familiar with the codebase and contact one of the developers for more details.
Dependencies
(All dependencies are already installed in the project repo)
About
Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina
Topics
genomicsgoogle-summer-of-codeintermineios
Resources
Readme
Activity
Custom properties
Stars
2 stars
Watchers
9 watching
Forks
1 fork
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Remove or un-stick sticky/fixed headers that block content
(function() {
function unstick() {
document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) {
if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {
el.style.position = 'static';
el.style.top = 'auto';
el.style.zIndex = 'auto';
}
});
}
unstick();
var observer = new MutationObserver(unstick);
observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });
})();
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
GitHub - intermine/intermine-ios: Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina · GitHub
Skip to content
BranchesTags
Repository files navigation
Intermine gene search iOS
The InterMine app allows you to search through integrated genomics data-sets at a variety of model-organism databases. Use structured search templates to find relationships between different data sets, inspect your lists of genes of interest and use them in further data analysis and find items of interest from a range of searches on your iPhone.
How to run the project?
  1. Download Xcode
  2. Clone the project from Github:
git clone https://github.com/joystate/intermine-ios.git
  1. Build and run project in Xcode
Architecture
The application is build following MVVM pattern. The following logical parts are present in the application:
  1. Models. There are two types of models - CoreData models (representing mine, mine model and saved search objects) and view models (providing UI elements for search results, lists and templates)
  2. Views. The main storyboard contains all view controllers and major UI elements. Navigation between view controllers is written in code with animated transitions when appropriate.
  3. Controllers. The main controller is tab bar controller. Navigation controllers are used to achieve the navigation inside the tabs.
  4. Networking module is build using Alamofire library. IntermineAPIClient performs network requests.
How to contribute?
To contribute to Intermine iOS app, one can do the following:
  1. Write tests. All modules of the app need tests, including all application models and layers. Writing tests is the best place to start for a new contributor, as it allows to get familiar with the codebase.
  2. Refactoring. Chasing perfection leads to better understanding of the codebase and makes the code more maintainable and clean.
  3. Github issues. Issues are written by developers of the application for the developers working on the application. Most likely, a new contributor will have trouble understanding the problem described in any particular issue. Try to get familiar with the codebase and contact one of the developers for more details.
Dependencies
(All dependencies are already installed in the project repo)
About
Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina
Topics
genomicsgoogle-summer-of-codeintermineios
Resources
Readme
Activity
Custom properties
Stars
2 stars
Watchers
9 watching
Forks
1 fork
Report repository
Releases
Packages
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
// Universal Dark Mode - works on any site
(function() {
var enabled = true;
function applyDarkMode() {
if (!enabled) return;
// Create style element if it doesn't exist
var style = document.getElementById('universal-dark-mode-style');
if (!style) {
style = document.createElement('style');
style.id = 'universal-dark-mode-style';
document.head.appendChild(style);
}
// Dark mode CSS - inverts colors but preserves images/video
style.textContent = '
/* Invert everything except media */
html {
filter: invert(1) hue-rotate(180deg) !important;
background: #1a1a2e !important;
}
/* Restore images, videos, iframes, canvas */
img, video, iframe, canvas, svg, picture, [style*="background-image"] {
filter: invert(1) hue-rotate(180deg) !important;
}
/* Preserve specific elements that should not be inverted */
.no-dark-mode, .no-dark-mode *,
[data-theme="light"], [data-theme="light"],
.ace_editor, .ace_editor *,
.CodeMirror, .CodeMirror *,
.monaco-editor, .monaco-editor *,
.markdown-body pre, .markdown-body pre *,
.highlight, .highlight *,
pre code, pre code * {
filter: none !important;
}
/* Fix common UI elements */
.modal, .popup, .dropdown-menu, .tooltip, .popover {
filter: invert(1) hue-rotate(180deg) !important;
background: #2d2d44 !important;
border-color: #444 !important;
}
/* Scrollbars */
::-webkit-scrollbar { background: #1a1a2e !important; }
::-webkit-scrollbar-thumb { background: #444 !important; }
::-webkit-scrollbar-thumb:hover { background: #555 !important; }
/* Selection */
::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }
::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }
';
}
function removeDarkMode() {
var style = document.getElementById('universal-dark-mode-style');
if (style) style.remove();
}
// Toggle with Alt+Shift+D
document.addEventListener('keydown', function(e) {
if (e.altKey && e.shiftKey && e.key === 'D') {
e.preventDefault();
enabled = !enabled;
if (enabled) {
applyDarkMode();
console.log('[Universal Dark Mode] Enabled');
} else {
removeDarkMode();
console.log('[Universal Dark Mode] Disabled');
}
}
});
// Apply on load
applyDarkMode();
// Re-apply on dynamic content
var observer = new MutationObserver(function(mutations) {
if (enabled && !document.getElementById('universal-dark-mode-style')) {
applyDarkMode();
}
});
observer.observe(document.head, { childList: true });
console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');
})();
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();
GitHub - intermine/intermine-ios: Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina · GitHub
Skip to content
BranchesTags
Repository files navigation
Intermine gene search iOS
The InterMine app allows you to search through integrated genomics data-sets at a variety of model-organism databases. Use structured search templates to find relationships between different data sets, inspect your lists of genes of interest and use them in further data analysis and find items of interest from a range of searches on your iPhone.
How to run the project?
  1. Download Xcode
  2. Clone the project from Github:
git clone https://github.com/joystate/intermine-ios.git
  1. Build and run project in Xcode
Architecture
The application is build following MVVM pattern. The following logical parts are present in the application:
  1. Models. There are two types of models - CoreData models (representing mine, mine model and saved search objects) and view models (providing UI elements for search results, lists and templates)
  2. Views. The main storyboard contains all view controllers and major UI elements. Navigation between view controllers is written in code with animated transitions when appropriate.
  3. Controllers. The main controller is tab bar controller. Navigation controllers are used to achieve the navigation inside the tabs.
  4. Networking module is build using Alamofire library. IntermineAPIClient performs network requests.
How to contribute?
To contribute to Intermine iOS app, one can do the following:
  1. Write tests. All modules of the app need tests, including all application models and layers. Writing tests is the best place to start for a new contributor, as it allows to get familiar with the codebase.
  2. Refactoring. Chasing perfection leads to better understanding of the codebase and makes the code more maintainable and clean.
  3. Github issues. Issues are written by developers of the application for the developers working on the application. Most likely, a new contributor will have trouble understanding the problem described in any particular issue. Try to get familiar with the codebase and contact one of the developers for more details.
Dependencies
(All dependencies are already installed in the project repo)
About
Intermine iOS application - developed as part of GSoC 2017 by Nadia Yudina
Topics
genomicsgoogle-summer-of-codeintermineios
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