Crop suitability - #280

Merged

remicousin merged 75 commits into

crop_suitability

Jul 20, 2023

Commits on Jul 20, 2023

linking files, and copying some from onset maproom (as templates)

drewmresnick
authored and
remicousin
committed
c28d8ca
editing the layout and maproom to run an as a standalone app

drewmresnick
authored and
remicousin
committed
a8aec6a
fix controls symlink

drewmresnick
authored and
remicousin
committed
550c54a
fix assets symlink

Drew Resnick
authored and
remicousin
committed
e3f6ddd
add pingrid symlink

Drew Resnick
authored and
remicousin
committed
83b3d40
starting to adapt the onset maproom to work for the crop suitability maproom

Drew Resnick
authored and
remicousin
committed
9c00cc0
adding a dropdown and some minor edits

Drew Resnick
authored and
remicousin
committed
b9d71aa
fix mistake in checking out old commit

Drew Resnick
authored and
remicousin
committed
c2c390d
trying to fix mistake in editing a file

Drew Resnick
authored and
remicousin
committed
e3b8eba
pushing most recent changes / additions trying to get tile generation to work

Drew Resnick
authored and
remicousin
committed
b06e64e
add seasonal means time series plot

Drew Resnick
authored and
remicousin
committed
af2c63c
getting the tile bug fixed and starting to play around with a function for crop suitability

Drew Resnick
authored and
remicousin
committed
805eab7
make tile print output of suitability analysis; create button for user to submit analysis params

Drew Resnick
authored and
remicousin
committed
c460d19
add title callback; try to add final parameters for crop suitability analysis

Drew Resnick
authored and
remicousin
committed
3e5fe47
remove empty paragraph inputs

Drew Resnick
authored and
remicousin
committed
edcd88b
improve readibility of function call

Drew Resnick
authored and
remicousin
committed
577c7aa
fix rainbow colorscale call from pingrid

Drew Resnick
authored and
remicousin
committed
2fb57b4
edit files to build using path defs in config files

Drew Resnick
authored and
remicousin
committed
6ed2412
change opacity of colorbar to 1

Drew Resnick
authored and
remicousin
committed
a6b67bd
remove unused rount_latLng func

Drew Resnick
authored and
remicousin
committed
6ebdc44
remove second .sum() where it is not needed

Drew Resnick
authored and
remicousin
committed
31a3cb8
remove unneeded outputs from callback

Drew Resnick
authored and
remicousin
committed
a4877b3
fix reading of file paths

Drew Resnick
authored and
remicousin
committed
55a9792
move default values for input params to country-wise config file just for nma

Drew Resnick
authored and
remicousin
committed
1a5a188
remove dry spell inputs for now

Drew Resnick
authored and
remicousin
committed
4e5747d
remove version of func for selecting season of data that was not used

Drew Resnick
authored and
remicousin
committed
771f478
update suitability index from % to int; update output plot to be bar graph

Drew Resnick
authored and
remicousin
committed
0ce73e4
update maproom title

Drew Resnick
authored and
remicousin
committed
9cd2a99
add option to select different data layers to display

Drew Resnick
authored and
remicousin
committed
f4f7fa9
first go at selecting subset of data before calling the crop_suit function

Drew Resnick
authored and
remicousin
committed
bc34b65
update config options for APP.run_server()

Drew Resnick
authored and
remicousin
committed
e878c52
fix pingrid.tile bug; fix error in run_server for defining debug

Drew Resnick
authored and
remicousin
committed
5fe89c5
fixing crop suitability func to handle dataArrays as input when a single lat/lng is selected

Drew Resnick
authored and
remicousin
committed
0587319
add more complex logic from app.py

Drew Resnick
authored and
remicousin
committed
9cd396a
making crop suitability function create new empty dataset; make inputs for the function all datasets before passing

Drew Resnick
authored and
remicousin
committed
bba1215
extract DataArray when loading in data; make change to config var names

Drew Resnick
authored and
remicousin
committed
5589ef7
move non country specific config entries to config-defaults

Drew Resnick
authored and
remicousin
committed
86f9bb7
update documentation in layout section

Drew Resnick
authored and
remicousin
committed
7744cd8
update title and description of layers selection ropdown

Drew Resnick
authored and
remicousin
committed
bb8c586
change id name for submit coords

Drew Resnick
authored and
remicousin
committed
b57b427
update map target year title and remove target year from ts callback

Drew Resnick
authored and
remicousin
committed
e2708dc
fix season and year controls to update on input for map title, ts, and tile

Drew Resnick
authored and
remicousin
committed
8837a72
make def of units more compact

Drew Resnick
authored and
remicousin
committed
5284c1e
update title for submit button

Drew Resnick
authored and
remicousin
committed
bff127d
change use of range to amplitude for calc of temperature range

Drew Resnick
authored and
remicousin
committed
fa802be
change input title for seasonal rainfall input

Drew Resnick
authored and
remicousin
committed
22fd084
add html_size option to Numbers() to control size of numbers input boxes

Drew Resnick
authored and
remicousin
committed
d693caf
change def of wet_day_def; add comments for param defs

Drew Resnick
authored and
remicousin
committed
f3ed48d
keep naming convention for time to be T

Drew Resnick
authored and
remicousin
committed
be2dfc2
remove erroneous text

Drew Resnick
authored and
remicousin
committed
053af32
update descriptions of variables

Drew Resnick
authored and
remicousin
committed
7d56a3e
comment out DB configuration for development env

Drew Resnick
authored and
remicousin
committed
22ab520
remove unused controls

Drew Resnick
authored and
remicousin
committed
c3c9e53
improve var name and delete unused var

Drew Resnick
authored and
remicousin
committed
bbd279c
edit time series title

Drew Resnick
authored and
remicousin
committed
efdd22e
hard code to add coordinates units for this maproom

Drew Resnick
authored and
remicousin
committed
86202df
update map title to reflect Malaria maproom

Drew Resnick
authored and
remicousin
committed
3e1702b
setting up so it builds like the other maprooms
remicousin
committed
700f0be
this is now its own repo
remicousin
committed
ebe2635
builds with the others and shows a plausible landing page
remicousin
committed
10b8796
working precip layer
remicousin
committed
71cfd6f
working suitability index is now default
remicousin
committed
bfbfdbb
typo
remicousin
committed
506f4e3
outputs min. Probably unncessary but will get to colorscales later
remicousin
committed
28cffbe
correcting a likely oversight of rebasing
remicousin
committed
ece2f4c
changed to dummy initial value for position and commented about it
remicousin
committed
30351c3
fill false is enough
remicousin
committed
6eb9f01
empty tiles can be checked for and returned as soon as there is data
remicousin
committed
f09b25f
more concise crop_suitability function
remicousin
committed
3e71f9d
further simplification: no need for where to make 1s and 0s (but does need 1*)
remicousin
committed
e08fb89
earlier tiling
remicousin
committed
41e47ed
no need for compute
remicousin
committed
98efaec
crop suitability function should get the data type it should get
remicousin
committed
f73a99d
more concise way to set up the xr.Dataset
remicousin
committed
29d8152
more proper place to convert the bool to int
remicousin
committed
ca54f35