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Isabl Inc.

3 followers
New York, New York

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docs docsPublic
📘 isabl guides and tutorials.
1
toil toilPublic
Forked from DataBiosphere/toil
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
Python 1
split_bed_by_index split_bed_by_indexPublic
Split bed intervals by estimated read counts from bam index
Nim
hileup hileupPublic
Forked from papaemmelab/hileup
horizontal pileup
C
cnvkit_unmatched cnvkit_unmatchedPublic
Forked from zhouyangyu/cnvkit
Copy number variant detection from targeted DNA sequencing
Python
AnnotSV AnnotSVPublic
Forked from zhouyangyu/AnnotSV
Annotation and Ranking of Structural Variation
Tcl

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Showing 10 of 11 repositories

manta Public
Structural variant and indel caller for mapped sequencing data
isabl/manta's past year of commit activity
C++ 0GPL-3.0 0 0 0 Updated May 12, 2025
split_bed_by_index Public
Split bed intervals by estimated read counts from bam index
isabl/split_bed_by_index's past year of commit activity
Nim 0MIT 0 2 0 Updated May 8, 2025
aws-parallelcluster-monitoring Public Forked from aws-samples/aws-parallelcluster-monitoring
Monitoring Dashboard for AWS ParallelCluster
isabl/aws-parallelcluster-monitoring's past year of commit activity
Shell 0MIT-0 33 0 0 Updated Oct 1, 2024
xHLA Public Forked from humanlongevity/HLA
xHLA: Fast and accurate HLA typing from short read sequence data
isabl/xHLA's past year of commit activity
Jupyter Notebook 0 56 0 0 Updated Jun 8, 2023
docs Public
📘 isabl guides and tutorials.
isabl/docs's past year of commit activity
1 0 0 0 Updated Mar 13, 2023
toil Public Forked from DataBiosphere/toil
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
isabl/toil's past year of commit activity
Python 1Apache-2.0 254 0 0 Updated Aug 3, 2022
dryclean Public Forked from mskilab-org/dryclean
Irons out wrinkles in noisy coverage data using robust PCA
isabl/dryclean's past year of commit activity
R 0 15 0 0 Updated Mar 15, 2022
THetA Public Forked from zhouyangyu/THetA
Tumor Heterogeneity Analysis (THetA) and THetA2 are algorithms that estimate the tumor purity and clonal/subclonal copy number aberrations directly from high-throughput DNA sequencing data. This repository includes the updated algorithm, called THetA2.
isabl/THetA's past year of commit activity
Python 0 32 0 0 Updated Aug 20, 2021
cnvkit_unmatched Public Forked from zhouyangyu/cnvkit
Copy number variant detection from targeted DNA sequencing
isabl/cnvkit_unmatched's past year of commit activity
Python 0 188 0 0 Updated Aug 10, 2021
hileup Public Forked from papaemmelab/hileup
horizontal pileup
isabl/hileup's past year of commit activity
C 0Apache-2.0 3 0 0 Updated Jul 26, 2021

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