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jmcmeen/README.md

John McMeen

Bioacoustics & machine-learning researcher · software engineer · educator

🔗 Connect

ORCIDResearchGateHuggingFaceMedium

🔬 Software Projects

ProjectDescription
bioamlaML driven bioacoustic analysis in Python
sarsSpecies-area relationship curve fitting in Python
observaDockerized iNaturalist open data explorer
terranaZero-config spatial API server in Rust
gq-terminalGQ GMC Geiger counter library in Python
riffyRIFF file data parser in Python

📊 Data Analyses & Datasets

ProjectDescription
etn-sarAnalyses from the Herpetofauna of Steele Creek Park Project
appalachian-sarAnalyses from the Amphibians in the Southern Appalachians Project
bioamla-datasetsCurated bioacoustics datasets

📚 Learning / Teaching Resources

ProjectDescription
frogs-of-steele-creekLearning resources for ecology and bioacoustics
intro-programming-concepts-csharpLearning supplements for an introductory programming course in C#
oop-concepts-csharpLearning supplements for an object-oriented programming course in C#
discrete-structuresLearning supplements for a course in discrete mathematics using Python
notes-onA collection of notes on various computer science and mathematics concepts

📄 Selected Publications

🛠️ Tech I Work (and Play) With

PythonPyTorchTensorFlowscikit--learnNumPyPandasJupyterHuggingFaceGradioStreamlitMLflowOpenCVFastAPIFlaskPostgreSQLPostGISDockerGrafanaNginxGitHub ActionsSphinxPyQtShellLinuxC SharpJavaHTMLGitGitHub

Pinned Loading

  1. sarssarsPublic

    Species-area relationship curve fitting in Python.

    Python

  2. observaobservaPublic

    A Dockerized platform for hosting and exploring iNaturalist Open Data from the AWS Open Registry.

    Shell

  3. bioamla-hubbioamla-hubPublic

    Bioacoustics for Machine Learning Applications

    2

  4. bioamlabioamlaPublic

    A Python package + CLI for audio analysis and machine learning-based audio classification, focusing on bioacoustic data.

    Python

  5. terranaterranaPublic

    Zero-config spatial API server written in Rust

    Rust

  6. riffyriffyPublic

    A pure Python library for parsing RIFF (Resource Interchange File Format) files data.

    Python 1