Bioinformatician working for @NBISweden and specializing in metagenomics, Snakemake workflows and reproducible research.
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- insect-biome-atlas/happ
insect-biome-atlas/happ PublicWorkflow for processing deep metabarcoding data
Python 5
- insect-biome-atlas/amplicon-multi-cutadapt
insect-biome-atlas/amplicon-multi-cutadapt PublicForked from biodiversitydata-se/amplicon-multi-cutadapt
Preprocessing of amplicon sequencing reads via a 4-step cutadapt workflow
- insect-biome-atlas/coidb
insect-biome-atlas/coidb PublicForked from biodiversitydata-se/coidb
A python package for downloading and processing metabarcoding references from BOLD
Python
- NBISweden/workshop-reproducible-research
NBISweden/workshop-reproducible-research PublicNBIS/Elixir course: Tools for Reproducible Research
- atlas
atlas PublicForked from metagenome-atlas/atlas
ATLAS - Three commands to start analyzing your metagenome data
Python
- NBISweden/nbis-meta
NBISweden/nbis-meta PublicA snakemake workflow for metagenomic projects
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