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1. aiaiPublic

   A command-line AI assistant supporting multiple interaction modes

   Python 3

2. SPRINTSPRINTPublic

   SNP-free RNA editing Identification Toolkit

   Python 50 19

3. BEERBEERPublic

   BEER: Batch EffEct Remover for single-cell data

   R 26 9

4. VectorVectorPublic

   Unsupervised Inference of Developmental Directions for Single Cells

   R 26 8

5. FitDevoFitDevoPublic

   FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight

   R 18 3

6. InferLoopInferLoopPublic

   InferLoop: leveraging single-cell chromatin accessibility for the signal of chromatin loop

   R 4