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@KietzmannLab@Kapoorlabs-paris@Kapoorlabs-CAPED@trackmate-sc

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kapoorlab/README.md

Hello! 👋 Dr. rer. nat. Varun Kapoor.

Our policy on usage of AI based tools for coding

Our signature workflow

LinkedInPayPalEntraPortfolio

I am founder of a non-profit KapoorLabs aimed at supporting researchers by providing high quality research software, you can view our organization at KapoorLabs.

I did my PhD in theoretical physics at Uni Rostock, Germany specializing in intense laser-atom interactions, you can read my PhD thesis.

I code for several organizations: KapoorLabs, KietzmannLab, TrackMate, conda-forge. Some of the code is open source and public while other is private (as required by our paid collaborators).

If you came here looking for custom software development/making us a consultant on your imaging projects or for custom derivation and solution of an issue requiring physics and mathematical support please use my email on the left to send a request detailing your requirements.

🔬 Segmentation, Action Classification and Tracking Software Packages

PackagePurposeCode
Complete Workflow packageFull workflowComplete Workflow package
Segmentation SolutionsSegmentationSegmentation Solutions
Action Classification SolutionsAction ClassificationAction Classification Solutions
Python and Napari based Tracking SolutionsTrackingTracking Solutions
Fiji-based Tracking SolutionTracking (using TrackMate-Oneat)Fiji based Tracking Solution

🤗 HuggingFace Spaces

SpaceDescriptionLink
🐢 EntraEntropy conserving transformation using divergence free vector fieldsEntra
📊 Portfolio Analysis for EuropeansPortfolio tracker for Europeans investing in US & EU markets with real-time prices, Sharpe ratio analysis, and S&P 500 comparisonPortfolio

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  1. Kapoorlabs-CAPED/vollseg-napariKapoorlabs-CAPED/vollseg-napariPublic

    Napari plugin for vollseg

    Python 14 1

  2. Kapoorlabs-CAPED/caped-ai-oneatKapoorlabs-CAPED/caped-ai-oneatPublic

    oneat = Osis Network for Event as Action Topologies. Available via pip package oneat

    Python 7

  3. trackmate-sc/TrackMate-Oneattrackmate-sc/TrackMate-OneatPublic

    TrackMate extension for oneat for verifying lineage trees

    Java 3 1

  4. Kapoorlabs-paris/goodplacedeeplearningKapoorlabs-paris/goodplacedeeplearningPublic

    Python course for AI developers: Lets do everything deep learning

    Jupyter Notebook

  5. Kapoorlabs-CAPED/KapoorLabs-VollSegKapoorlabs-CAPED/KapoorLabs-VollSegPublic

    Jupyter Notebook 6

  6. Kapoorlabs-CAPED/KapoorLabs-LightningKapoorlabs-CAPED/KapoorLabs-LightningPublic

    Python 1