KBase Incubator Projects

BERIL Research Observatory - Exploring microbial ecology with the KBase Data Lakehouse

MCP Server for Environmental Data

CRAFT — Co-Scientist Research Assessment & Framing Tools. Platform for the BERIL research-assessment skill stack (beril-adversarial + beril-paper-writer + beril-presentation-maker).

Harsh adversarial reviewer for BERIL deployments

BERIL Presentation Maker — drafts evidence-grounded scientific presentations (talks + posters) from BERDL analysis projects, in KBase brand. Distributed as a Claude Code skill.

iqtree image tor the cdm task service

Template skeleton for CTS (CDM Task Service) bioinformatics tool wrappers

CTS wrapper for skani paired with GTDB R232 reference sketches (reuses cdm_gtdbtk refdata bundle).

CTS wrapper for skani (ANI calculator). Generic, no bundled refdata.