Co-Director of the UAB Biological Data Sciences Institutional core. A fan of R, Python, workflow management systems and data science topics.
Highlights
- Pro
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- awesome-single-cell
awesome-single-cell PublicForked from seandavi/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
- rnaseq
rnaseq PublicForked from nf-core/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Nextflow 1
- bds_rstudio_template
bds_rstudio_template PublicForked from mdefende/bds_rstudio_template
Template OOD app for using BDS's RStudio Singularity app
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- scnanoseq
scnanoseq PublicForked from nf-core/scnanoseq
Single-cell/nuclei pipeline for data derived from Oxford Nanopore
Nextflow
- website_nextflow
website_nextflow PublicForked from nextflow-io/website
Nextflow public web site
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