System.DllNotFoundException: lib/linux/x86_64/libgit2-1196807.so on Ubuntu Linux

[evil-shrike]

I have difficulties with LibGit2Sharp while running Cake (with Cake.Git addin) build on Linux Ubuntu 16.04 in Docker - cake-contrib/Cake_Git#68
But I managed to isolate issue with LibGit2Sharp only.

Reproduction steps

touch gt.cs

using LibGit2Sharp;
using System;

public class Program
{
 public static void Main()
 {
 Console.WriteLine("HI");
 var repo = new Repository("/opt/buildagent/work/e1fb3d71588668ec");
 }
}

csc gt.cs /r:LibGit2Sharp.dll

mono gt.exe

HI

Unhandled Exception:
System.TypeInitializationException: The type initializer for 'LibGit2Sharp.Core.NativeMethods' threw an exception. ---> System.DllNotFoundException: lib/linux/x86_64/libgit2-1196807.so
 at (wrapper managed-to-native) LibGit2Sharp.Core.NativeMethods.git_libgit2_init()
 at LibGit2Sharp.Core.NativeMethods+LibraryLifetimeObject..ctor () [0x00006] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 at LibGit2Sharp.Core.NativeMethods..cctor () [0x00054] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 --- End of inner exception stack trace ---
 at LibGit2Sharp.Core.Proxy.git_repository_open (System.String path) [0x00008] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 at LibGit2Sharp.Repository..ctor (System.String path, LibGit2Sharp.RepositoryOptions options, LibGit2Sharp.Repository+RepositoryRequiredParameter requiredParameter) [0x00312] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 at LibGit2Sharp.Repository..ctor (System.String path) [0x00000] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 at Program.Main () [0x0000c] in <f40fe756e0ec4a4d9aed452251bd0a53>:0
[ERROR] FATAL UNHANDLED EXCEPTION: System.TypeInitializationException: The type initializer for 'LibGit2Sharp.Core.NativeMethods' threw an exception. ---> System.DllNotFoundException: lib/linux/x86_64/libgit2-1196807.so
 at (wrapper managed-to-native) LibGit2Sharp.Core.NativeMethods.git_libgit2_init()
 at LibGit2Sharp.Core.NativeMethods+LibraryLifetimeObject..ctor () [0x00006] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 at LibGit2Sharp.Core.NativeMethods..cctor () [0x00054] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 --- End of inner exception stack trace ---
 at LibGit2Sharp.Core.Proxy.git_repository_open (System.String path) [0x00008] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 at LibGit2Sharp.Repository..ctor (System.String path, LibGit2Sharp.RepositoryOptions options, LibGit2Sharp.Repository+RepositoryRequiredParameter requiredParameter) [0x00312] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 at LibGit2Sharp.Repository..ctor (System.String path) [0x00000] in <c31a5a5a3e0a424683609ecf6c55de77>:0
 at Program.Main () [0x0000c] in <f40fe756e0ec4a4d9aed452251bd0a53>:0

Mono looks up for native module in subfolder bacause of config

cat LibGit2Sharp.dll.config

<configuration>
 <dllmap os="linux" cpu="x86-64" wordsize="64" dll="git2-1196807" target="lib/linux/x86_64/libgit2-1196807.so" />
 <dllmap os="osx" cpu="x86,x86-64" dll="git2-1196807" target="lib/osx/libgit2-1196807.dylib" />
</configuration>

the file lib/linux/x86_64/libgit2-1196807.so does exist. also tried to copy it besides my .exe module.

Expected behavior

no error

Actual behavior

System.TypeInitializationException: The type initializer for 'LibGit2Sharp.Core.NativeMethods' threw an exception. ---> System.DllNotFoundException: lib/linux/x86_64/libgit2-1196807.so

Version of LibGit2Sharp (release number or SHA1)

libgit2-1196807.so

Operating system(s) tested; .NET runtime tested

# cat /etc/os-release
NAME="Ubuntu"
VERSION="16.04.3 LTS (Xenial Xerus)"
ID=ubuntu
ID_LIKE=debian
PRETTY_NAME="Ubuntu 16.04.3 LTS"
VERSION_ID="16.04"
HOME_URL="http://www.ubuntu.com/"
SUPPORT_URL="http://help.ubuntu.com/"
BUG_REPORT_URL="http://bugs.launchpad.net/ubuntu/"
VERSION_CODENAME=xenial
UBUNTU_CODENAME=xenial

# mono --version
Mono JIT compiler version 5.12.0.226 (tarball Thu May 3 09:48:32 UTC 2018)
Copyright (C) 2002-2014 Novell, Inc, Xamarin Inc and Contributors. www.mono-project.com
 TLS: __thread
 SIGSEGV: altstack
 Notifications: epoll
 Architecture: amd64
 Disabled: none
 Misc: softdebug
 Interpreter: yes
 LLVM: supported, not enabled.
 GC: sgen (concurrent by default)

[evil-shrike]

As a workaround for me worked this trick with installing libgit2-24 globally and setup its target path in LibGit2Sharp.dll.config (as /usr/lib/x86_64-linux-gnu/libgit2.so.24). But as I'm using it via Cake/Cake.Git it's very hard to use this workaround.

[evil-shrike]

I seems I solved the issue by installing apt-get isntall libc6 libcurl3. Not sure about the need of libc6 but after I installed libcurl3 libgit2sharp began working.

That comment helps - #1472 (comment)

[bording]

@evil-shrike curl is a requirement, so it sounds like you've fixed the problem!

[evil-shrike]

@bording yeah, but may be it makes sense to put the required curl module besides libgit2-1196807.so? Or at least put some warning in Readme?

[bording]

Attempting to bundle other libraries instead of linking against the system versions is not something we want to do, especially for something like OpenSSL.

Adding something to the README that lists all of the required native dependencies is a good idea!

[ethomson]

@bording yeah, but may be it makes sense to put the required curl module besides libgit2-1196807.so? Or at least put some warning in Readme?

We are not going to ship OpenSSL (which we would have to do, transitively), and you don’t want us to. If there are security holes in it, you want a single source of OpenSSL that you can patch. You want to know that you fixed all of them when you do. You don’t want some version that we installed still being vulnerable.

[pauldotknopf]

I agree about openssl, but I think you should statically link libcurl. It is a problematic dependency that various greatly between Ubuntu versions and packages on Ubuntu.

I've had more trouble with libcurl than any other library, trying to find the "sweet spot" of configuration for my OS and docker images.

Kong/insomnia#878

[pauldotknopf]

Also, the latest .NET Core 2.1.1 depends upon libcurl4.

System.Net.Http.Native.so:
	linux-vdso.so.1 (0x00007ffd677ef000)
	libcurl.so.4 => /usr/lib/x86_64-linux-gnu/libcurl.so.4 (0x00007f77ccfaa000)
	libstdc++.so.6 => /usr/lib/x86_64-linux-gnu/libstdc++.so.6 (0x00007f77ccc1c000)
	libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007f77cc87e000)
	libgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x00007f77cc666000)
	libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f77cc275000)
	libnghttp2.so.14 => /usr/lib/x86_64-linux-gnu/libnghttp2.so.14 (0x00007f77cc050000)
	libidn2.so.0 => /usr/lib/x86_64-linux-gnu/libidn2.so.0 (0x00007f77cbe33000)
	librtmp.so.1 => /usr/lib/x86_64-linux-gnu/librtmp.so.1 (0x00007f77cbc17000)
	libpsl.so.5 => /usr/lib/x86_64-linux-gnu/libpsl.so.5 (0x00007f77cba09000)
	libssl.so.1.1 => /usr/lib/x86_64-linux-gnu/libssl.so.1.1 (0x00007f77cb79f000)
	libcrypto.so.1.1 => /usr/lib/x86_64-linux-gnu/libcrypto.so.1.1 (0x00007f77cb327000)
	libgssapi_krb5.so.2 => /usr/lib/x86_64-linux-gnu/libgssapi_krb5.so.2 (0x00007f77cb0dc000)
	libldap_r-2.4.so.2 => /usr/lib/x86_64-linux-gnu/libldap_r-2.4.so.2 (0x00007f77cae8a000)
	liblber-2.4.so.2 => /usr/lib/x86_64-linux-gnu/liblber-2.4.so.2 (0x00007f77cac7c000)
	libz.so.1 => /lib/x86_64-linux-gnu/libz.so.1 (0x00007f77caa5f000)
	libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007f77ca840000)
	/lib64/ld-linux-x86-64.so.2 (0x00007f77cd42d000)
	libunistring.so.2 => /usr/lib/x86_64-linux-gnu/libunistring.so.2 (0x00007f77ca4c2000)
	libgnutls.so.30 => /usr/lib/x86_64-linux-gnu/libgnutls.so.30 (0x00007f77ca15d000)
	libhogweed.so.4 => /usr/lib/x86_64-linux-gnu/libhogweed.so.4 (0x00007f77c9f29000)
	libnettle.so.6 => /usr/lib/x86_64-linux-gnu/libnettle.so.6 (0x00007f77c9cf3000)
	libgmp.so.10 => /usr/lib/x86_64-linux-gnu/libgmp.so.10 (0x00007f77c9a72000)
	libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007f77c986e000)
	libkrb5.so.3 => /usr/lib/x86_64-linux-gnu/libkrb5.so.3 (0x00007f77c9598000)
	libk5crypto.so.3 => /usr/lib/x86_64-linux-gnu/libk5crypto.so.3 (0x00007f77c9366000)
	libcom_err.so.2 => /lib/x86_64-linux-gnu/libcom_err.so.2 (0x00007f77c9162000)
	libkrb5support.so.0 => /usr/lib/x86_64-linux-gnu/libkrb5support.so.0 (0x00007f77c8f57000)
	libresolv.so.2 => /lib/x86_64-linux-gnu/libresolv.so.2 (0x00007f77c8d3c000)
	libsasl2.so.2 => /usr/lib/x86_64-linux-gnu/libsasl2.so.2 (0x00007f77c8b21000)
	libgssapi.so.3 => /usr/lib/x86_64-linux-gnu/libgssapi.so.3 (0x00007f77c88e0000)
	libp11-kit.so.0 => /usr/lib/x86_64-linux-gnu/libp11-kit.so.0 (0x00007f77c85b1000)
	libtasn1.so.6 => /usr/lib/x86_64-linux-gnu/libtasn1.so.6 (0x00007f77c839e000)
	libkeyutils.so.1 => /lib/x86_64-linux-gnu/libkeyutils.so.1 (0x00007f77c819a000)
	libheimntlm.so.0 => /usr/lib/x86_64-linux-gnu/libheimntlm.so.0 (0x00007f77c7f91000)
	libkrb5.so.26 => /usr/lib/x86_64-linux-gnu/libkrb5.so.26 (0x00007f77c7d04000)
	libasn1.so.8 => /usr/lib/x86_64-linux-gnu/libasn1.so.8 (0x00007f77c7a62000)
	libhcrypto.so.4 => /usr/lib/x86_64-linux-gnu/libhcrypto.so.4 (0x00007f77c782c000)
	libroken.so.18 => /usr/lib/x86_64-linux-gnu/libroken.so.18 (0x00007f77c7616000)
	libffi.so.6 => /usr/lib/x86_64-linux-gnu/libffi.so.6 (0x00007f77c740e000)
	libwind.so.0 => /usr/lib/x86_64-linux-gnu/libwind.so.0 (0x00007f77c71e5000)
	libheimbase.so.1 => /usr/lib/x86_64-linux-gnu/libheimbase.so.1 (0x00007f77c6fd6000)
	libhx509.so.5 => /usr/lib/x86_64-linux-gnu/libhx509.so.5 (0x00007f77c6d8c000)
	libsqlite3.so.0 => /usr/lib/x86_64-linux-gnu/libsqlite3.so.0 (0x00007f77c6a83000)
	libcrypt.so.1 => /lib/x86_64-linux-gnu/libcrypt.so.1 (0x00007f77c684b000)

libgit2-b0d9952.so: /usr/lib/x86_64-linux-gnu/libcurl.so.4: version `CURL_OPENSSL_3' not found (required by /docgen/runtimes/linux-x64/native/libgit2-b0d9952.so)
 linux-vdso.so.1 (0x00007ffdbbaa4000)
 librt.so.1 => /lib/x86_64-linux-gnu/librt.so.1 (0x00007ff922d2b000)
 libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007ff922b0c000)
 libcurl.so.4 => /usr/lib/x86_64-linux-gnu/libcurl.so.4 (0x00007ff92288d000)
 libssl.so.1.0.0 => /usr/lib/x86_64-linux-gnu/libssl.so.1.0.0 (0x00007ff922625000)
 libcrypto.so.1.0.0 => /usr/lib/x86_64-linux-gnu/libcrypto.so.1.0.0 (0x00007ff9221e2000)
 libz.so.1 => /lib/x86_64-linux-gnu/libz.so.1 (0x00007ff921fc5000)
 libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007ff921bd4000)
 /lib64/ld-linux-x86-64.so.2 (0x00007ff923244000)
 libnghttp2.so.14 => /usr/lib/x86_64-linux-gnu/libnghttp2.so.14 (0x00007ff9219af000)
 libidn2.so.0 => /usr/lib/x86_64-linux-gnu/libidn2.so.0 (0x00007ff921792000)
 librtmp.so.1 => /usr/lib/x86_64-linux-gnu/librtmp.so.1 (0x00007ff921576000)
 libpsl.so.5 => /usr/lib/x86_64-linux-gnu/libpsl.so.5 (0x00007ff921368000)
 libssl.so.1.1 => /usr/lib/x86_64-linux-gnu/libssl.so.1.1 (0x00007ff9210fe000)
 libcrypto.so.1.1 => /usr/lib/x86_64-linux-gnu/libcrypto.so.1.1 (0x00007ff920c86000)
 libgssapi_krb5.so.2 => /usr/lib/x86_64-linux-gnu/libgssapi_krb5.so.2 (0x00007ff920a3b000)
 libldap_r-2.4.so.2 => /usr/lib/x86_64-linux-gnu/libldap_r-2.4.so.2 (0x00007ff9207e9000)
 liblber-2.4.so.2 => /usr/lib/x86_64-linux-gnu/liblber-2.4.so.2 (0x00007ff9205db000)
 libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007ff9203d7000)
 libunistring.so.2 => /usr/lib/x86_64-linux-gnu/libunistring.so.2 (0x00007ff920059000)
 libgnutls.so.30 => /usr/lib/x86_64-linux-gnu/libgnutls.so.30 (0x00007ff91fcf4000)
 libhogweed.so.4 => /usr/lib/x86_64-linux-gnu/libhogweed.so.4 (0x00007ff91fac0000)
 libnettle.so.6 => /usr/lib/x86_64-linux-gnu/libnettle.so.6 (0x00007ff91f88a000)
 libgmp.so.10 => /usr/lib/x86_64-linux-gnu/libgmp.so.10 (0x00007ff91f609000)
 libkrb5.so.3 => /usr/lib/x86_64-linux-gnu/libkrb5.so.3 (0x00007ff91f333000)
 libk5crypto.so.3 => /usr/lib/x86_64-linux-gnu/libk5crypto.so.3 (0x00007ff91f101000)
 libcom_err.so.2 => /lib/x86_64-linux-gnu/libcom_err.so.2 (0x00007ff91eefd000)
 libkrb5support.so.0 => /usr/lib/x86_64-linux-gnu/libkrb5support.so.0 (0x00007ff91ecf2000)
 libresolv.so.2 => /lib/x86_64-linux-gnu/libresolv.so.2 (0x00007ff91ead7000)
 libsasl2.so.2 => /usr/lib/x86_64-linux-gnu/libsasl2.so.2 (0x00007ff91e8bc000)
 libgssapi.so.3 => /usr/lib/x86_64-linux-gnu/libgssapi.so.3 (0x00007ff91e67b000)
 libp11-kit.so.0 => /usr/lib/x86_64-linux-gnu/libp11-kit.so.0 (0x00007ff91e34c000)
 libtasn1.so.6 => /usr/lib/x86_64-linux-gnu/libtasn1.so.6 (0x00007ff91e139000)
 libkeyutils.so.1 => /lib/x86_64-linux-gnu/libkeyutils.so.1 (0x00007ff91df35000)
 libheimntlm.so.0 => /usr/lib/x86_64-linux-gnu/libheimntlm.so.0 (0x00007ff91dd2c000)
 libkrb5.so.26 => /usr/lib/x86_64-linux-gnu/libkrb5.so.26 (0x00007ff91da9f000)
 libasn1.so.8 => /usr/lib/x86_64-linux-gnu/libasn1.so.8 (0x00007ff91d7fd000)
 libhcrypto.so.4 => /usr/lib/x86_64-linux-gnu/libhcrypto.so.4 (0x00007ff91d5c7000)
 libroken.so.18 => /usr/lib/x86_64-linux-gnu/libroken.so.18 (0x00007ff91d3b1000)
 libffi.so.6 => /usr/lib/x86_64-linux-gnu/libffi.so.6 (0x00007ff91d1a9000)
 libwind.so.0 => /usr/lib/x86_64-linux-gnu/libwind.so.0 (0x00007ff91cf80000)
 libheimbase.so.1 => /usr/lib/x86_64-linux-gnu/libheimbase.so.1 (0x00007ff91cd71000)
 libhx509.so.5 => /usr/lib/x86_64-linux-gnu/libhx509.so.5 (0x00007ff91cb27000)
 libsqlite3.so.0 => /usr/lib/x86_64-linux-gnu/libsqlite3.so.0 (0x00007ff91c81e000)
 libcrypt.so.1 => /lib/x86_64-linux-gnu/libcrypt.so.1 (0x00007ff91c5e6000)
 libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007ff91c248000)

As it stands, I don't think LibGit2Sharp.NativeBinaries currently work on the latest .NET Core.

Try to use it in the latest microsoft/dotnet:2.1.1-runtime-bionic docker image.

[pauldotknopf]

I rebuilt libgit2 using the latest .NET Core docker images.

diff --git a/Dockerfile.linux-x64 b/Dockerfile.linux-x64
index 3a5c69c..745a352 100644
--- a/Dockerfile.linux-x64
+++ b/Dockerfile.linux-x64
@@ -1,4 +1,4 @@
-FROM ubuntu:14.04
+FROM microsoft/dotnet:2.1.1-runtime-bionic
 WORKDIR /nativebinaries
 COPY . /nativebinaries/

This works. It is a lot more setup with my docker images, considering I know how to manually build libgit2 and put it in the right place, but it works now.

[pauldotknopf]

I am building libgit2 as a part of my docker build now. This ensures the resulting binary is valid for the platform.

FROM microsoft/dotnet:2.1.1-runtime-bionic
RUN apt-get update
RUN apt -y install cmake libcurl4-openssl-dev libssl-dev pkg-config git
RUN apt-get clean

RUN git clone https://github.com/libgit2/libgit2.git /libgit2 && \
 cd /libgit2 && \
 git checkout b0d9952c318a3d1b8917e06ad46b9110c0c28831

RUN cd /libgit2 && \
 cmake -DCMAKE_BUILD_TYPE:STRING=Release \
 -DBUILD_CLAR:BOOL=OFF \
 -DUSE_SSH=OFF \
 -DENABLE_TRACE=ON \
 -DLIBGIT2_FILENAME=git2-b0d9952 \
 -DCMAKE_OSX_ARCHITECTURES="i386;x86_64" \
 . && \
 cmake --build .

FROM microsoft/dotnet:2.1.1-runtime-bionic
COPY --from=0 /libgit2/libgit2-b0d9952.so /yourapp/runtimes/linux-x64/native

[bording]

We are currently using the same native library for all versions of Ubuntu. If 18.04 has changed the version of curl it ships, then we'll have to build a specific version of the library for it and ship it in the native binaries package.

[tzachshabtay]

This was reproduced on Debian 9 as well, so not just an Ubuntu issue.