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1. rust-bio/rust-biorust-bio/rust-bioPublic

   This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

   Rust 1.8k 217

2. wheaton5/souporcellwheaton5/souporcellPublic

   Clustering scRNAseq by genotypes

   Python 212 54

3. TopoQualTopoQualPublic

   Code for TopoQual polishes circular consensus sequencing data and accurately predicts quality scores

   Python 4

4. lcskgraphlcskgraphPublic

   Extending lcsk++ to graph to support semiglobal poa

   Rust 3 1

5. lcskpoalcskpoaPublic

   LCSKPOA: Enabling banded semi-global partial order alignments via efficient and accurate backbone generation through extended lcsk++.

   Rust 3

6. space_cellspace_cellPublic

   spatial transcriptomic clustering,

   Python