Markov model

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1. PyEMMAPyEMMAPublic archive

   🚂 Python API for Emma's Markov Model Algorithms 🚂

   Python 340 128

2. pyemma_tutorialspyemma_tutorialsPublic

   How to analyze molecular dynamics data with PyEMMA

   Jupyter Notebook 88 34

3. molPXmolPXPublic

   IPython API to visualize MD-trajectories along projected trajectories inside a Jupyter notebook

   Python 44 4

4. msmtoolsmsmtoolsPublic

   Tools for estimating and analyzing Markov state models

   Python 41 26

5. thermotoolsthermotoolsPublic

   Winter is coming...

   Python 14 5

6. deeptimedeeptimePublic

   Deep learning meets molecular dynamics.

   Jupyter Notebook 189 41