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Uproot tutorial

This is a tutorial on Uproot, a package for reading and writing ROOT files for columnar analysis. It was written by Mason Proffitt using the Software Carpentry's lesson template and first taught during the Software Carpentry Workshop at CERN on November 29, 2019.

This repository builds a webpage that is live here!

The Uproot tutorial is part of the HSF training curriculum.

Contributing

We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any questions, concerns, or experience any difficulties along the way.

We'd like to ask you to familiarize yourself with our Contribution Guide and have a look at the more detailed guidelines on proper formatting, ways to render the lesson locally, and even how to write new episodes.

Maintainer(s)

Authors

A list of contributors to the lesson can be found in AUTHORS

Citation

To cite this lesson, please consult with CITATION

About

Introductory tutorial for Uproot and Awkward Array

masonproffitt.github.io/uproot-tutorial/

Resources

Readme
License

Code of conduct

Code of conduct

Contributing

Contributing
Activity

Stars

2 stars

Watchers

1 watching

Forks

3 forks
Report repository

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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all 
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

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Uproot tutorial
This is a tutorial on Uproot, a package for reading and writing ROOT files for columnar analysis.
It was written by Mason Proffitt using the Software Carpentry's lesson template and first taught during the Software Carpentry Workshop at CERN on November 29, 2019.
This repository builds a webpage that is live here!
The Uproot tutorial is part of the HSF training curriculum.
Contributing
We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any
questions, concerns, or experience any difficulties along the way.
We'd like to ask you to familiarize yourself with our Contribution Guide and have a look at
the more detailed guidelines on proper formatting, ways to render the lesson locally, and even
how to write new episodes.
Maintainer(s)
Authors
A list of contributors to the lesson can be found in AUTHORS
Citation
To cite this lesson, please consult with CITATION
About
Introductory tutorial for Uproot and Awkward Array
masonproffitt.github.io/uproot-tutorial/
Resources
Readme
License
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Stars
2 stars
Watchers
1 watching
Forks
3 forks
Report repository
Sponsor this project
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix");
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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Uproot tutorial
This is a tutorial on Uproot, a package for reading and writing ROOT files for columnar analysis.
It was written by Mason Proffitt using the Software Carpentry's lesson template and first taught during the Software Carpentry Workshop at CERN on November 29, 2019.
This repository builds a webpage that is live here!
The Uproot tutorial is part of the HSF training curriculum.
Contributing
We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any
questions, concerns, or experience any difficulties along the way.
We'd like to ask you to familiarize yourself with our Contribution Guide and have a look at
the more detailed guidelines on proper formatting, ways to render the lesson locally, and even
how to write new episodes.
Maintainer(s)
Authors
A list of contributors to the lesson can be found in AUTHORS
Citation
To cite this lesson, please consult with CITATION
About
Introductory tutorial for Uproot and Awkward Array
masonproffitt.github.io/uproot-tutorial/
Resources
Readme
License
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Stars
2 stars
Watchers
1 watching
Forks
3 forks
Report repository
Sponsor this project
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms");
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

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BranchesTags
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Build Status
Uproot tutorial
This is a tutorial on Uproot, a package for reading and writing ROOT files for columnar analysis.
It was written by Mason Proffitt using the Software Carpentry's lesson template and first taught during the Software Carpentry Workshop at CERN on November 29, 2019.
This repository builds a webpage that is live here!
The Uproot tutorial is part of the HSF training curriculum.
Contributing
We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any
questions, concerns, or experience any difficulties along the way.
We'd like to ask you to familiarize yourself with our Contribution Guide and have a look at
the more detailed guidelines on proper formatting, ways to render the lesson locally, and even
how to write new episodes.
Maintainer(s)
Authors
A list of contributors to the lesson can be found in AUTHORS
Citation
To cite this lesson, please consult with CITATION
About
Introductory tutorial for Uproot and Awkward Array
masonproffitt.github.io/uproot-tutorial/
Resources
Readme
License
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Stars
2 stars
Watchers
1 watching
Forks
3 forks
Report repository
Sponsor this project
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links");
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

Skip to content
BranchesTags
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Build Status
Uproot tutorial
This is a tutorial on Uproot, a package for reading and writing ROOT files for columnar analysis.
It was written by Mason Proffitt using the Software Carpentry's lesson template and first taught during the Software Carpentry Workshop at CERN on November 29, 2019.
This repository builds a webpage that is live here!
The Uproot tutorial is part of the HSF training curriculum.
Contributing
We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any
questions, concerns, or experience any difficulties along the way.
We'd like to ask you to familiarize yourself with our Contribution Guide and have a look at
the more detailed guidelines on proper formatting, ways to render the lesson locally, and even
how to write new episodes.
Maintainer(s)
Authors
A list of contributors to the lesson can be found in AUTHORS
Citation
To cite this lesson, please consult with CITATION
About
Introductory tutorial for Uproot and Awkward Array
masonproffitt.github.io/uproot-tutorial/
Resources
Readme
License
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Stars
2 stars
Watchers
1 watching
Forks
3 forks
Report repository
Sponsor this project
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default");
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
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Build Status
Uproot tutorial
This is a tutorial on Uproot, a package for reading and writing ROOT files for columnar analysis.
It was written by Mason Proffitt using the Software Carpentry's lesson template and first taught during the Software Carpentry Workshop at CERN on November 29, 2019.
This repository builds a webpage that is live here!
The Uproot tutorial is part of the HSF training curriculum.
Contributing
We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any
questions, concerns, or experience any difficulties along the way.
We'd like to ask you to familiarize yourself with our Contribution Guide and have a look at
the more detailed guidelines on proper formatting, ways to render the lesson locally, and even
how to write new episodes.
Maintainer(s)
Authors
A list of contributors to the lesson can be found in AUTHORS
Citation
To cite this lesson, please consult with CITATION
About
Introductory tutorial for Uproot and Awkward Array
masonproffitt.github.io/uproot-tutorial/
Resources
Readme
License
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Stars
2 stars
Watchers
1 watching
Forks
3 forks
Report repository
Sponsor this project
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers");
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
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Build Status
Uproot tutorial
This is a tutorial on Uproot, a package for reading and writing ROOT files for columnar analysis.
It was written by Mason Proffitt using the Software Carpentry's lesson template and first taught during the Software Carpentry Workshop at CERN on November 29, 2019.
This repository builds a webpage that is live here!
The Uproot tutorial is part of the HSF training curriculum.
Contributing
We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any
questions, concerns, or experience any difficulties along the way.
We'd like to ask you to familiarize yourself with our Contribution Guide and have a look at
the more detailed guidelines on proper formatting, ways to render the lesson locally, and even
how to write new episodes.
Maintainer(s)
Authors
A list of contributors to the lesson can be found in AUTHORS
Citation
To cite this lesson, please consult with CITATION
About
Introductory tutorial for Uproot and Awkward Array
masonproffitt.github.io/uproot-tutorial/
Resources
Readme
License
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Stars
2 stars
Watchers
1 watching
Forks
3 forks
Report repository
Sponsor this project
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode");
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();

Skip to content
BranchesTags
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Build Status
Uproot tutorial
This is a tutorial on Uproot, a package for reading and writing ROOT files for columnar analysis.
It was written by Mason Proffitt using the Software Carpentry's lesson template and first taught during the Software Carpentry Workshop at CERN on November 29, 2019.
This repository builds a webpage that is live here!
The Uproot tutorial is part of the HSF training curriculum.
Contributing
We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any
questions, concerns, or experience any difficulties along the way.
We'd like to ask you to familiarize yourself with our Contribution Guide and have a look at
the more detailed guidelines on proper formatting, ways to render the lesson locally, and even
how to write new episodes.
Maintainer(s)
Authors
A list of contributors to the lesson can be found in AUTHORS
Citation
To cite this lesson, please consult with CITATION
About
Introductory tutorial for Uproot and Awkward Array
masonproffitt.github.io/uproot-tutorial/
Resources
Readme
License
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Stars
2 stars
Watchers
1 watching
Forks
3 forks
Report repository
Sponsor this project
Contributors
Languages