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McGill Ding Lab

Dr. Jun Ding's lab at McGill University

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  1. UNAGI UNAGIPublic

    UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.

    Jupyter Notebook 59 16

  2. CellAgentChat CellAgentChatPublic

    Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data

    Jupyter Notebook 39 6

  3. MATES MATESPublic

    A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

    Jupyter Notebook 33 6

  4. scSemiProfiler scSemiProfilerPublic

    A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.

    Jupyter Notebook 26 2

  5. SIDISH SIDISHPublic

    SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations

    Jupyter Notebook 23 7

  6. scCross scCrossPublic

    A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simulation of single-cell multi-omics data. Our model excels at m…

    Python 19 3

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, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all 
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McGill Ding Lab · GitHub
Skip to content
@mcgilldinglab

McGill Ding Lab

Dr. Jun Ding's lab at McGill University

Popular repositories
Loading
  1. 
UNAGI
UNAGIPublic
    
UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations. 
    Jupyter Notebook
59

16

  2. 
CellAgentChat
CellAgentChatPublic
    
Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data

    Jupyter Notebook
39

6

  3. 
MATES
MATESPublic
    
A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

    Jupyter Notebook
33

6

  4. 
scSemiProfiler
scSemiProfilerPublic
    
A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.

    Jupyter Notebook
26

2

  5. 
SIDISH
SIDISHPublic
    
SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations

    Jupyter Notebook
23

7

  6. 
scCross
scCrossPublic
    
A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simulation of single-cell multi-omics data. Our model excels at m…

    Python
19

3


Repositories

Showing 10 of 28 repositories
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, 'i');
if (__m === '*' || __re.test(location.href)) {
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McGill Ding Lab · GitHub
Skip to content
@mcgilldinglab

McGill Ding Lab

Dr. Jun Ding's lab at McGill University

Popular repositories
Loading
  1. 
UNAGI
UNAGIPublic
    
UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations. 
    Jupyter Notebook
59

16

  2. 
CellAgentChat
CellAgentChatPublic
    
Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data

    Jupyter Notebook
39

6

  3. 
MATES
MATESPublic
    
A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

    Jupyter Notebook
33

6

  4. 
scSemiProfiler
scSemiProfilerPublic
    
A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.

    Jupyter Notebook
26

2

  5. 
SIDISH
SIDISHPublic
    
SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations

    Jupyter Notebook
23

7

  6. 
scCross
scCrossPublic
    
A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simulation of single-cell multi-omics data. Our model excels at m…

    Python
19

3


Repositories

Showing 10 of 28 repositories
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People

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, 'i');
if (__m === '*' || __re.test(location.href)) {
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})();
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try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
McGill Ding Lab · GitHub
Skip to content
@mcgilldinglab

McGill Ding Lab

Dr. Jun Ding's lab at McGill University

Popular repositories
Loading
  1. 
UNAGI
UNAGIPublic
    
UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations. 
    Jupyter Notebook
59

16

  2. 
CellAgentChat
CellAgentChatPublic
    
Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data

    Jupyter Notebook
39

6

  3. 
MATES
MATESPublic
    
A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

    Jupyter Notebook
33

6

  4. 
scSemiProfiler
scSemiProfilerPublic
    
A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.

    Jupyter Notebook
26

2

  5. 
SIDISH
SIDISHPublic
    
SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations

    Jupyter Notebook
23

7

  6. 
scCross
scCrossPublic
    
A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simulation of single-cell multi-omics data. Our model excels at m…

    Python
19

3


Repositories

Showing 10 of 28 repositories
View all repositories
People

This organization has no public members. You must be a member to see who’s a part of this organization.

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Loading…

, 'i');
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observer.observe(document.body, { childList: true, subtree: true });
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} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '
McGill Ding Lab · GitHub
Skip to content
@mcgilldinglab

McGill Ding Lab

Dr. Jun Ding's lab at McGill University

Popular repositories
Loading
  1. 
UNAGI
UNAGIPublic
    
UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations. 
    Jupyter Notebook
59

16

  2. 
CellAgentChat
CellAgentChatPublic
    
Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data

    Jupyter Notebook
39

6

  3. 
MATES
MATESPublic
    
A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

    Jupyter Notebook
33

6

  4. 
scSemiProfiler
scSemiProfilerPublic
    
A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.

    Jupyter Notebook
26

2

  5. 
SIDISH
SIDISHPublic
    
SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations

    Jupyter Notebook
23

7

  6. 
scCross
scCrossPublic
    
A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simulation of single-cell multi-omics data. Our model excels at m…

    Python
19

3


Repositories

Showing 10 of 28 repositories
View all repositories
People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages
Loading…
Most used topics
Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
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(function() {
function tryTheater() {
var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]');
if (btn && !btn.classList.contains('activated')) {
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lastUrl = location.href;
setTimeout(tryTheater, 500);
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})();
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '
McGill Ding Lab · GitHub
Skip to content
@mcgilldinglab

McGill Ding Lab

Dr. Jun Ding's lab at McGill University

Popular repositories
Loading
  1. 
UNAGI
UNAGIPublic
    
UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations. 
    Jupyter Notebook
59

16

  2. 
CellAgentChat
CellAgentChatPublic
    
Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data

    Jupyter Notebook
39

6

  3. 
MATES
MATESPublic
    
A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

    Jupyter Notebook
33

6

  4. 
scSemiProfiler
scSemiProfilerPublic
    
A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.

    Jupyter Notebook
26

2

  5. 
SIDISH
SIDISHPublic
    
SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations

    Jupyter Notebook
23

7

  6. 
scCross
scCrossPublic
    
A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simulation of single-cell multi-omics data. Our model excels at m…

    Python
19

3


Repositories

Showing 10 of 28 repositories
View all repositories
People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages
Loading…
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Loading…

, 'i');
if (__m === '*' || __re.test(location.href)) {
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function unstick() {
document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) {
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})();
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
})();
McGill Ding Lab · GitHub
Skip to content
@mcgilldinglab

McGill Ding Lab

Dr. Jun Ding's lab at McGill University

Popular repositories
Loading
  1. 
UNAGI
UNAGIPublic
    
UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations. 
    Jupyter Notebook
59

16

  2. 
CellAgentChat
CellAgentChatPublic
    
Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data

    Jupyter Notebook
39

6

  3. 
MATES
MATESPublic
    
A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

    Jupyter Notebook
33

6

  4. 
scSemiProfiler
scSemiProfilerPublic
    
A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.

    Jupyter Notebook
26

2

  5. 
SIDISH
SIDISHPublic
    
SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations

    Jupyter Notebook
23

7

  6. 
scCross
scCrossPublic
    
A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simulation of single-cell multi-omics data. Our model excels at m…

    Python
19

3


Repositories

Showing 10 of 28 repositories
View all repositories
People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages
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Most used topics
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