micom-dev

micom Public

Python package to study microbial communities using metabolic modeling.

Python 135Apache-2.0 23 15 1 Updated Aug 11, 2026

A Qiime plugin for MICOM.

Python 10Apache-2.0 6 1 0 Updated Jul 21, 2026

Workflows and input data for the construction of the standard MICOM model databases.

Nextflow 2Apache-2.0 3 3 0 Updated Nov 13, 2025

media Public

Environmental growth media for MICOM.

Jupyter Notebook 6Apache-2.0 5 4 0 Updated Nov 7, 2022

paper Public

Materials and Code for the micom manuscript.

Python 3Apache-2.0 3 1 0 Updated Mar 15, 2021

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