Memorial Sloan Kettering

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1. vcf2mafvcf2mafPublic

   Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

   Perl 419 220

2. facetsfacetsPublic

   Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.

   R 162 70

3. ngs-filtersngs-filtersPublic

   Filters for false-positive mutation calls in NGS

   R 34 20

4. iCallSViCallSVPublic

   Forked from rhshah/iCallSV

   A Framework to call Structural Variants from NGS based datasets

   Python 3 1

5. mutation-signaturesmutation-signaturesPublic

   Create mutation signatures from MAF's, and decompose them into Stratton signatures

   R 61 29