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@muscbridge

Brain Imaging Diffusion Group (BRIDGE) Lab

BRIDGE lab specializes in cutting-edge analysis of MRI images. We develop both algorithms and pipelines to extract meaningful metrics from brain MRI images

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  1. PyDKE PyDKEPublic

    A hands-free DTI, DKI, FBI and FBWM preprocessing pipeline. Information on algorithms and preprocessing steps are available at https://www.biorxiv.org/content/10.1101/2021.10.20.465189v1 A video tu…

    Python 31 8

  2. DKE DKEPublic

    The Diffusional Kurtosis Estimator (DKE) is software for processing Diffusional Kurtosis Imaging (DKI) data

    MATLAB 8 4

  3. dTractSeg dTractSegPublic

    A TractSeg pipeline compatible with PyDesigner outputs

    Jupyter Notebook 6

  4. FBWM FBWMPublic

    Fiber ball white matter modeling

    MATLAB 1 2

  5. Mice-ROI-Processing Mice-ROI-ProcessingPublic

    Script designed to extract parameters from DKI maps based on ImageJ-drawn ROIs

    MATLAB 1 1

  6. mcr-v97 mcr-v97Public

    Matlab (C) Runtime for Matlab R2019b (v.9.7) in Docker

    Dockerfile 1 1

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