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@nadeemlab

Nadeem Lab @ Memorial Sloan Kettering Cancer Center

Integrative Biomedical Data Analysis Lab (macro: radiology/surgery + meso: pathology + micro: molecular)

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  1. DeepLIIFDeepLIIFPublic

    Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]

    Python 259 92

  2. CEPCEPPublic

    Computational Endoscopy Platform (advanced deep learning toolset for analyzing endoscopy videos) [MICCAI'25, MICCAI'22, MICCAI'21, ISBI'21, CVPR'20]

    Python 83 11

  3. Physics-ArXPhysics-ArXPublic

    Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]

    Python 78 18

  4. DoseRTXDoseRTXPublic

    Domain knowledge driven 3D radiation dose prediction [PMB'22]

    Python 52 11

  5. ImPartialImPartialPublic

    Interactive deep learning cell segmentation using partial annotations [MICCAI'26]

    Python 45 3

  6. smprofilersmprofilerPublic

    Spatial Multiomics Profiler for Spatial Characterization of Tissue Microenvironment (https://smprofiler.io)

    Python 23 2

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