NCBI - National Center for Biotechnology Information/NLM/NIH

NCBI C++ Toolkit package sources

Incremental building of phylogenetic distance trees

ncbi-vdb

SRA Tools

NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.

AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and protein sequence.

NCBI C++ Toolkit package recipe

StxTyper uses a standardized algorithm to accurately type both known and unknown Shiga toxin operons from assembled genomic sequence.

Log monitoring and gathering infrastructure to feed analytics

Support material for the article on SRA Lite