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Open Targets Archive

Archived Open Targets repos no longer under active development. For active repos, please visit http://github.com/opentargets.

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https://opentargets.org/
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platform-app platform-appPublic archive
Open Targets Platform web app
JavaScript 119 27
genetics-sumstat-harmoniser genetics-sumstat-harmoniserPublic archive
Harmonise GWAS summary statistics against a reference VCF
Python 40 7
genetics-gold-standards genetics-gold-standardsPublic archive
GWAS gold standards repository
Python 40 2
genetics-finemapping genetics-finemappingPublic archive
Fine-mapping pipeline for Open Targets Genetics
Python 29 10
opentargets-py opentargets-pyPublic archive
Python client for the Open Targets REST API at targetvalidation.org
Python 26 8
genetics-colocalisation genetics-colocalisationPublic archive
Colocalisation pipeline for Open Targets Genetics
Python 18 9

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Showing 10 of 126 repositories

orchestration Public archive
Open Targets pipeline orchestration layer
opentargets-archive/orchestration's past year of commit activity
Python 4Apache-2.0 3 0 2 Updated Jul 7, 2026
pts Public archive
Open Targets Pipeline Transformation Stage
opentargets-archive/pts's past year of commit activity
Python 0Apache-2.0 1 0 2 Updated Jul 7, 2026
ot_croissant Public archive
Exploratory version for OT croissant
opentargets-archive/ot_croissant's past year of commit activity
Python 1 0 0 0 Updated Jul 3, 2026
pis Public archive
Open Targets Pipeline Input Stage
opentargets-archive/pis's past year of commit activity
Python 7Apache-2.0 6 0 0 Updated Jul 1, 2026
hackathon-tasks Public archive
Central hub for Open Targets Hackathon 2025 - Track projects, collaborate with teams, and build innovative tools using the Open Targets Platform
opentargets-archive/hackathon-tasks's past year of commit activity
4 1 93 0 Updated May 11, 2026
hackathon-l2g Public archive
opentargets-archive/hackathon-l2g's past year of commit activity
Jupyter Notebook 2 0 0 0 Updated May 11, 2026
QC_sumstat Public archive
Quality control tests on summary statistics data
opentargets-archive/QC_sumstat's past year of commit activity
Python 0 1 0 0 Updated May 11, 2026
genetics-l2g-scoring Public archive
Locus-to-gene scoring pipeline
opentargets-archive/genetics-l2g-scoring's past year of commit activity
Python 13Apache-2.0 5 0 1 Updated May 11, 2026
genetics-colocalisation Public archive
Colocalisation pipeline for Open Targets Genetics
opentargets-archive/genetics-colocalisation's past year of commit activity
Python 18Apache-2.0 9 0 1 Updated May 11, 2026
genetics_data_revision Public archive
This repository hosts the code to adapt the genetics output data to their data and schema iterations
opentargets-archive/genetics_data_revision's past year of commit activity
Python 0 0 0 0 Updated May 11, 2026

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