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@python-microscopy python-microscopy

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    11 repositories

    • python-microscopy

      Public
      The python-microscopy environment - an open-source package for light microscopy
      Python
      •
      GNU General Public License v3.0
      •26•100•117•29•Updated Sep 3, 2026Sep 3, 2026

    • ch-shrinkwrap

      Public
      Mesh shrinkwrapping for super-resolution data
      Python
      •
      GNU General Public License v3.0
      •0•9•1•1•Updated Aug 27, 2026Aug 27, 2026

    • pymecompress

      Public
      Fast compression of image data using with noise level quantization
      C
      •
      BSD 3-Clause "New" or "Revised" License
      •2•3•0•1•Updated Nov 21, 2025Nov 21, 2025

    • pyme-conda-recipes

      Public
      Conda recipes for PYME dependencies which are not distributed in the "conda" or "anaconda" channels
      Batchfile
      •2•0•2•0•Updated May 30, 2025May 30, 2025

    • mProfile

      Public
      Matlab style line-based profiling for python
      Python
      •
      Other
      •1•1•1•0•Updated Mar 18, 2024Mar 18, 2024

    • pyme-warp-drive

      Public
      GPU-acceleration package for the PYthon Microscopy Environment (PYME).
      Cuda
      •
      Other
      •2•3•0•0•Updated Oct 24, 2022Oct 24, 2022

    • example_notebooks

      Public
      Repository for example notebooks using PYME (contributions welcome)!
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Jan 19, 2022Jan 19, 2022

    • pyme-plugin

      Public template
      Template for making plug-ins for the Python-Microscopy Environment (PYME)
      Python
      •
      BSD 2-Clause "Simplified" License
      •2•3•9•0•Updated Mar 28, 2021Mar 28, 2021

    • pyme-omero

      Public
      PYME plugin adding OMERO interoperability
      Python
      •
      GNU General Public License v3.0
      •0•1•1•0•Updated Feb 6, 2021Feb 6, 2021

    • pyme-sampledb

      Public
      Django database web app for tracking sample information
      Python
      •1•1•0•0•Updated Dec 11, 2019Dec 11, 2019

    • pyFFTW

      Public
      fork of github.com/pyFFTW/pyFFTW with setup.py fixed to avoid problems with io redirection on windows server VMs
      Python
      •
      Other
      •114•0•0•0•Updated Dec 1, 2019Dec 1, 2019
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