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Arranger

Arranger is a versatile, model-agnostic data discovery API for OpenSearch and Elasticsearch, designed to simplify building search interfaces for complex datasets. A React component library is included for building interactive search UIs.


Arranger is part of Overture, a collection of open-source software microservices used to create platforms for researchers to organize and share genomics data.

Documentation

Technical resources for those working with or contributing to the project live in the /docs folder of this repository, and are also published, fully rendered, on our official documentation site.

Development Environment

  • Node.js (v22 or higher)
  • Docker (v4.39.0 or higher)
  • OpenSearch 1.x or higher, or Elasticsearch 7.x

Note: For Elasticsearch, only the default (licensed) distribution is supported; the discontinued ES OSS distribution is not. Elasticsearch 8.x is not yet supported, and the bundled client is @elastic/elasticsearch v7.

Support & Contributions

  • For support, feature requests, and bug reports, please see our Support Guide.
  • For detailed information on how to contribute to this project, please see our Contributing Guide.

Related Software

The Overture platform includes the following components:


SoftwareDescription
ScoreTransfer data to and from any cloud-based storage system
SongCatalogue and manage metadata associated to file data spread across cloud storage systems
MaestroOrganizing your distributed data into a centralized Elasticsearch index
ArrangerA search API with reusable UI components
StageA React-based web portal scaffolding
LyricA model-agnostic, tabular data submission system
LecternSchema Manager, designed to validate, store, and manage collections of data dictionaries.

Funding Acknowledgement

Overture is supported by grant #U24CA253529 from the National Cancer Institute at the US National Institutes of Health, and additional funding from Genome Canada, the Canada Foundation for Innovation, the Canadian Institutes of Health Research, Canarie, and the Ontario Institute for Cancer Research.

About

Data portal API and component generation

www.overture.bio/documentation/arranger/

Topics

data-portaldata-portal-frontends

Resources

Readme
AGPL-3.0 license

Code of conduct

Code of conduct

Contributing

Contributing
Activity
Custom properties

Stars

32 stars

Watchers

23 watching

Forks

24 forks
Report repository

Releases

Packages

Used by

Contributors

Languages

, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Add copy buttons to all 
 blocks\n(function() {\n function addCopyButtons() {\n document.querySelectorAll('pre code').forEach(function(codeBlock) {\n if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;\n codeBlock.parentElement.setAttribute('data-copy-added', 'true');\n \n var btn = document.createElement('button');\n btn.textContent = 'Copy';\n btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';\n btn.onmouseover = function() { this.style.opacity = '1'; };\n btn.onmouseout = function() { this.style.opacity = '0.7'; };\n btn.onclick = function() {\n navigator.clipboard.writeText(codeBlock.textContent).then(function() {\n btn.textContent = 'Copied!';\n setTimeout(function() { btn.textContent = 'Copy'; }, 1500);\n });\n };\n codeBlock.parentElement.style.position = 'relative';\n codeBlock.parentElement.appendChild(btn);\n });\n }\n \n addCopyButtons();\n \n // Re-run on dynamic content\n var observer = new MutationObserver(addCopyButtons);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Add Copy Buttons to Code Blocks");
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '

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Arranger
Arranger is a versatile, model-agnostic data discovery API for OpenSearch and Elasticsearch, designed to simplify building search interfaces for complex datasets. A React component library is included for building interactive search UIs.

Arranger is part of Overture, a collection of open-source software microservices used to create platforms for researchers to organize and share genomics data.
Documentation
Technical resources for those working with or contributing to the project live in the /docs folder of this repository, and are also published, fully rendered, on our official documentation site.
Development Environment
  • Node.js (v22 or higher)
  • Docker (v4.39.0 or higher)
  • OpenSearch 1.x or higher, or Elasticsearch 7.x
Note: For Elasticsearch, only the default (licensed) distribution is supported; the discontinued ES OSS distribution is not. Elasticsearch 8.x is not yet supported, and the bundled client is @elastic/elasticsearch v7.
Support & Contributions
  • For support, feature requests, and bug reports, please see our Support Guide.
  • For detailed information on how to contribute to this project, please see our Contributing Guide.
Related Software
The Overture platform includes the following components:

SoftwareDescription
ScoreTransfer data to and from any cloud-based storage system
SongCatalogue and manage metadata associated to file data spread across cloud storage systems
MaestroOrganizing your distributed data into a centralized Elasticsearch index
ArrangerA search API with reusable UI components
StageA React-based web portal scaffolding
LyricA model-agnostic, tabular data submission system
LecternSchema Manager, designed to validate, store, and manage collections of data dictionaries.
Funding Acknowledgement
Overture is supported by grant #U24CA253529 from the National Cancer Institute at the US National Institutes of Health, and additional funding from Genome Canada, the Canada Foundation for Innovation, the Canadian Institutes of Health Research, Canarie, and the Ontario Institute for Cancer Research.
About
Data portal API and component generation
www.overture.bio/documentation/arranger/
Topics
data-portaldata-portal-frontends
Resources
Readme
AGPL-3.0 license
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Custom properties
Stars
32 stars
Watchers
23 watching
Forks
24 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix");
}
} catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
Repository files navigation
Arranger
Arranger is a versatile, model-agnostic data discovery API for OpenSearch and Elasticsearch, designed to simplify building search interfaces for complex datasets. A React component library is included for building interactive search UIs.

Arranger is part of Overture, a collection of open-source software microservices used to create platforms for researchers to organize and share genomics data.
Documentation
Technical resources for those working with or contributing to the project live in the /docs folder of this repository, and are also published, fully rendered, on our official documentation site.
Development Environment
  • Node.js (v22 or higher)
  • Docker (v4.39.0 or higher)
  • OpenSearch 1.x or higher, or Elasticsearch 7.x
Note: For Elasticsearch, only the default (licensed) distribution is supported; the discontinued ES OSS distribution is not. Elasticsearch 8.x is not yet supported, and the bundled client is @elastic/elasticsearch v7.
Support & Contributions
  • For support, feature requests, and bug reports, please see our Support Guide.
  • For detailed information on how to contribute to this project, please see our Contributing Guide.
Related Software
The Overture platform includes the following components:

SoftwareDescription
ScoreTransfer data to and from any cloud-based storage system
SongCatalogue and manage metadata associated to file data spread across cloud storage systems
MaestroOrganizing your distributed data into a centralized Elasticsearch index
ArrangerA search API with reusable UI components
StageA React-based web portal scaffolding
LyricA model-agnostic, tabular data submission system
LecternSchema Manager, designed to validate, store, and manage collections of data dictionaries.
Funding Acknowledgement
Overture is supported by grant #U24CA253529 from the National Cancer Institute at the US National Institutes of Health, and additional funding from Genome Canada, the Canada Foundation for Innovation, the Canadian Institutes of Health Research, Canarie, and the Ontario Institute for Cancer Research.
About
Data portal API and component generation
www.overture.bio/documentation/arranger/
Topics
data-portaldata-portal-frontends
Resources
Readme
AGPL-3.0 license
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Custom properties
Stars
32 stars
Watchers
23 watching
Forks
24 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms");
}
} catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
Repository files navigation
Arranger
Arranger is a versatile, model-agnostic data discovery API for OpenSearch and Elasticsearch, designed to simplify building search interfaces for complex datasets. A React component library is included for building interactive search UIs.

Arranger is part of Overture, a collection of open-source software microservices used to create platforms for researchers to organize and share genomics data.
Documentation
Technical resources for those working with or contributing to the project live in the /docs folder of this repository, and are also published, fully rendered, on our official documentation site.
Development Environment
  • Node.js (v22 or higher)
  • Docker (v4.39.0 or higher)
  • OpenSearch 1.x or higher, or Elasticsearch 7.x
Note: For Elasticsearch, only the default (licensed) distribution is supported; the discontinued ES OSS distribution is not. Elasticsearch 8.x is not yet supported, and the bundled client is @elastic/elasticsearch v7.
Support & Contributions
  • For support, feature requests, and bug reports, please see our Support Guide.
  • For detailed information on how to contribute to this project, please see our Contributing Guide.
Related Software
The Overture platform includes the following components:

SoftwareDescription
ScoreTransfer data to and from any cloud-based storage system
SongCatalogue and manage metadata associated to file data spread across cloud storage systems
MaestroOrganizing your distributed data into a centralized Elasticsearch index
ArrangerA search API with reusable UI components
StageA React-based web portal scaffolding
LyricA model-agnostic, tabular data submission system
LecternSchema Manager, designed to validate, store, and manage collections of data dictionaries.
Funding Acknowledgement
Overture is supported by grant #U24CA253529 from the National Cancer Institute at the US National Institutes of Health, and additional funding from Genome Canada, the Canada Foundation for Innovation, the Canadian Institutes of Health Research, Canarie, and the Ontario Institute for Cancer Research.
About
Data portal API and component generation
www.overture.bio/documentation/arranger/
Topics
data-portaldata-portal-frontends
Resources
Readme
AGPL-3.0 license
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Custom properties
Stars
32 stars
Watchers
23 watching
Forks
24 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links");
}
} catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); }
})();
(function(){
try {
var __m = "youtube.com";
var __re = new RegExp('^' + "youtube\\.com" + '

Skip to content
BranchesTags
Repository files navigation
Arranger
Arranger is a versatile, model-agnostic data discovery API for OpenSearch and Elasticsearch, designed to simplify building search interfaces for complex datasets. A React component library is included for building interactive search UIs.

Arranger is part of Overture, a collection of open-source software microservices used to create platforms for researchers to organize and share genomics data.
Documentation
Technical resources for those working with or contributing to the project live in the /docs folder of this repository, and are also published, fully rendered, on our official documentation site.
Development Environment
  • Node.js (v22 or higher)
  • Docker (v4.39.0 or higher)
  • OpenSearch 1.x or higher, or Elasticsearch 7.x
Note: For Elasticsearch, only the default (licensed) distribution is supported; the discontinued ES OSS distribution is not. Elasticsearch 8.x is not yet supported, and the bundled client is @elastic/elasticsearch v7.
Support & Contributions
  • For support, feature requests, and bug reports, please see our Support Guide.
  • For detailed information on how to contribute to this project, please see our Contributing Guide.
Related Software
The Overture platform includes the following components:

SoftwareDescription
ScoreTransfer data to and from any cloud-based storage system
SongCatalogue and manage metadata associated to file data spread across cloud storage systems
MaestroOrganizing your distributed data into a centralized Elasticsearch index
ArrangerA search API with reusable UI components
StageA React-based web portal scaffolding
LyricA model-agnostic, tabular data submission system
LecternSchema Manager, designed to validate, store, and manage collections of data dictionaries.
Funding Acknowledgement
Overture is supported by grant #U24CA253529 from the National Cancer Institute at the US National Institutes of Health, and additional funding from Genome Canada, the Canada Foundation for Innovation, the Canadian Institutes of Health Research, Canarie, and the Ontario Institute for Cancer Research.
About
Data portal API and component generation
www.overture.bio/documentation/arranger/
Topics
data-portaldata-portal-frontends
Resources
Readme
AGPL-3.0 license
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Custom properties
Stars
32 stars
Watchers
23 watching
Forks
24 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default");
}
} catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
Repository files navigation
Arranger
Arranger is a versatile, model-agnostic data discovery API for OpenSearch and Elasticsearch, designed to simplify building search interfaces for complex datasets. A React component library is included for building interactive search UIs.

Arranger is part of Overture, a collection of open-source software microservices used to create platforms for researchers to organize and share genomics data.
Documentation
Technical resources for those working with or contributing to the project live in the /docs folder of this repository, and are also published, fully rendered, on our official documentation site.
Development Environment
  • Node.js (v22 or higher)
  • Docker (v4.39.0 or higher)
  • OpenSearch 1.x or higher, or Elasticsearch 7.x
Note: For Elasticsearch, only the default (licensed) distribution is supported; the discontinued ES OSS distribution is not. Elasticsearch 8.x is not yet supported, and the bundled client is @elastic/elasticsearch v7.
Support & Contributions
  • For support, feature requests, and bug reports, please see our Support Guide.
  • For detailed information on how to contribute to this project, please see our Contributing Guide.
Related Software
The Overture platform includes the following components:

SoftwareDescription
ScoreTransfer data to and from any cloud-based storage system
SongCatalogue and manage metadata associated to file data spread across cloud storage systems
MaestroOrganizing your distributed data into a centralized Elasticsearch index
ArrangerA search API with reusable UI components
StageA React-based web portal scaffolding
LyricA model-agnostic, tabular data submission system
LecternSchema Manager, designed to validate, store, and manage collections of data dictionaries.
Funding Acknowledgement
Overture is supported by grant #U24CA253529 from the National Cancer Institute at the US National Institutes of Health, and additional funding from Genome Canada, the Canada Foundation for Innovation, the Canadian Institutes of Health Research, Canarie, and the Ontario Institute for Cancer Research.
About
Data portal API and component generation
www.overture.bio/documentation/arranger/
Topics
data-portaldata-portal-frontends
Resources
Readme
AGPL-3.0 license
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Custom properties
Stars
32 stars
Watchers
23 watching
Forks
24 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers");
}
} catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); }
})();
(function(){
try {
var __m = "*";
var __re = new RegExp('^' + ".*" + '

Skip to content
BranchesTags
Repository files navigation
Arranger
Arranger is a versatile, model-agnostic data discovery API for OpenSearch and Elasticsearch, designed to simplify building search interfaces for complex datasets. A React component library is included for building interactive search UIs.

Arranger is part of Overture, a collection of open-source software microservices used to create platforms for researchers to organize and share genomics data.
Documentation
Technical resources for those working with or contributing to the project live in the /docs folder of this repository, and are also published, fully rendered, on our official documentation site.
Development Environment
  • Node.js (v22 or higher)
  • Docker (v4.39.0 or higher)
  • OpenSearch 1.x or higher, or Elasticsearch 7.x
Note: For Elasticsearch, only the default (licensed) distribution is supported; the discontinued ES OSS distribution is not. Elasticsearch 8.x is not yet supported, and the bundled client is @elastic/elasticsearch v7.
Support & Contributions
  • For support, feature requests, and bug reports, please see our Support Guide.
  • For detailed information on how to contribute to this project, please see our Contributing Guide.
Related Software
The Overture platform includes the following components:

SoftwareDescription
ScoreTransfer data to and from any cloud-based storage system
SongCatalogue and manage metadata associated to file data spread across cloud storage systems
MaestroOrganizing your distributed data into a centralized Elasticsearch index
ArrangerA search API with reusable UI components
StageA React-based web portal scaffolding
LyricA model-agnostic, tabular data submission system
LecternSchema Manager, designed to validate, store, and manage collections of data dictionaries.
Funding Acknowledgement
Overture is supported by grant #U24CA253529 from the National Cancer Institute at the US National Institutes of Health, and additional funding from Genome Canada, the Canada Foundation for Innovation, the Canadian Institutes of Health Research, Canarie, and the Ontario Institute for Cancer Research.
About
Data portal API and component generation
www.overture.bio/documentation/arranger/
Topics
data-portaldata-portal-frontends
Resources
Readme
AGPL-3.0 license
Code of conduct
Code of conduct
Contributing
Contributing
Activity
Custom properties
Stars
32 stars
Watchers
23 watching
Forks
24 forks
Report repository
Releases
Packages
Used by
Contributors
Languages

, 'i');
if (__m === '*' || __re.test(location.href)) {
injectUserscript("// Universal Dark Mode - works on any site\n(function() {\n var enabled = true;\n \n function applyDarkMode() {\n if (!enabled) return;\n \n // Create style element if it doesn't exist\n var style = document.getElementById('universal-dark-mode-style');\n if (!style) {\n style = document.createElement('style');\n style.id = 'universal-dark-mode-style';\n document.head.appendChild(style);\n }\n \n // Dark mode CSS - inverts colors but preserves images/video\n style.textContent = '\n /* Invert everything except media */\n html {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #1a1a2e !important;\n }\n \n /* Restore images, videos, iframes, canvas */\n img, video, iframe, canvas, svg, picture, [style*=\"background-image\"] {\n filter: invert(1) hue-rotate(180deg) !important;\n }\n \n /* Preserve specific elements that should not be inverted */\n .no-dark-mode, .no-dark-mode *,\n [data-theme=\"light\"], [data-theme=\"light\"],\n .ace_editor, .ace_editor *,\n .CodeMirror, .CodeMirror *,\n .monaco-editor, .monaco-editor *,\n .markdown-body pre, .markdown-body pre *,\n .highlight, .highlight *,\n pre code, pre code * {\n filter: none !important;\n }\n \n /* Fix common UI elements */\n .modal, .popup, .dropdown-menu, .tooltip, .popover {\n filter: invert(1) hue-rotate(180deg) !important;\n background: #2d2d44 !important;\n border-color: #444 !important;\n }\n \n /* Scrollbars */\n ::-webkit-scrollbar { background: #1a1a2e !important; }\n ::-webkit-scrollbar-thumb { background: #444 !important; }\n ::-webkit-scrollbar-thumb:hover { background: #555 !important; }\n \n /* Selection */\n ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; }\n ';\n }\n \n function removeDarkMode() {\n var style = document.getElementById('universal-dark-mode-style');\n if (style) style.remove();\n }\n \n // Toggle with Alt+Shift+D\n document.addEventListener('keydown', function(e) {\n if (e.altKey && e.shiftKey && e.key === 'D') {\n e.preventDefault();\n enabled = !enabled;\n if (enabled) {\n applyDarkMode();\n console.log('[Universal Dark Mode] Enabled');\n } else {\n removeDarkMode();\n console.log('[Universal Dark Mode] Disabled');\n }\n }\n });\n \n // Apply on load\n applyDarkMode();\n \n // Re-apply on dynamic content\n var observer = new MutationObserver(function(mutations) {\n if (enabled && !document.getElementById('universal-dark-mode-style')) {\n applyDarkMode();\n }\n });\n observer.observe(document.head, { childList: true });\n \n console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle');\n})();", "Universal Dark Mode");
}
} catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); }
})();
})();

Skip to content
BranchesTags
Repository files navigation
Arranger
Arranger is a versatile, model-agnostic data discovery API for OpenSearch and Elasticsearch, designed to simplify building search interfaces for complex datasets. A React component library is included for building interactive search UIs.

Arranger is part of Overture, a collection of open-source software microservices used to create platforms for researchers to organize and share genomics data.
Documentation
Technical resources for those working with or contributing to the project live in the /docs folder of this repository, and are also published, fully rendered, on our official documentation site.
Development Environment
  • Node.js (v22 or higher)
  • Docker (v4.39.0 or higher)
  • OpenSearch 1.x or higher, or Elasticsearch 7.x
Note: For Elasticsearch, only the default (licensed) distribution is supported; the discontinued ES OSS distribution is not. Elasticsearch 8.x is not yet supported, and the bundled client is @elastic/elasticsearch v7.
Support & Contributions
  • For support, feature requests, and bug reports, please see our Support Guide.
  • For detailed information on how to contribute to this project, please see our Contributing Guide.
Related Software
The Overture platform includes the following components:

SoftwareDescription
ScoreTransfer data to and from any cloud-based storage system
SongCatalogue and manage metadata associated to file data spread across cloud storage systems
MaestroOrganizing your distributed data into a centralized Elasticsearch index
ArrangerA search API with reusable UI components
StageA React-based web portal scaffolding
LyricA model-agnostic, tabular data submission system
LecternSchema Manager, designed to validate, store, and manage collections of data dictionaries.
Funding Acknowledgement
Overture is supported by grant #U24CA253529 from the National Cancer Institute at the US National Institutes of Health, and additional funding from Genome Canada, the Canada Foundation for Innovation, the Canadian Institutes of Health Research, Canarie, and the Ontario Institute for Cancer Research.
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www.overture.bio/documentation/arranger/
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