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1. clinical_variant_databaseclinical_variant_databasePublic

   Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensembl dataset. Originally developed as part of a Masters in Bioi…

   Ruby 10 2

2. variant_parservariant_parserPublic

   Selects possible pathogenic variants from an Alamut output

   Ruby 1

3. targeted_sequencing_pipelinetargeted_sequencing_pipelinePublic

   Targeted sequencing pipeline for the Royal Devon & Exeter Molecular Genetics lab.

   HTML 1

4. virtual_parservirtual_parserPublic

   Virtual panel parser with ruleset for pathogenic variants, for use with Cellbase annotated variants

   Clojure

5. gw_meta_analysis_low_muscle_strengthgw_meta_analysis_low_muscle_strengthPublic archive

   Analysis code and processing stages for Genome-Wide meta-analysis of low grip strength in older people.

   R 6 1

6. SCAMLSCAMLPublic

   Single Cell RNA analysis pipeline for Seurat outputs of microglial iPSC, using Scikit Learn Models

   Python