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  1. helpful_commandshelpful_commandsPublic

    Command-line tools, commands, and code snippets for performing routine data processing and bioinformatics tasks.

    48 14

  2. helpful_linkshelpful_linksPublic

    Links to resources related to bioinformatics and data analysis.

    28 6

  3. cgviewcgviewPublic

    CGView is a Java package for generating high-quality, zoomable maps of circular genomes.

    Java 55 18

  4. cgview_comparison_toolcgview_comparison_toolPublic

    The CGView Comparison Tool (CCT) is a package for visually comparing bacterial, plasmid, chloroplast, and mitochondrial sequences.

    Perl 37 18

  5. sequence_manipulation_suitesequence_manipulation_suitePublic

    A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipulation Suite is commonly used by molecular biologists, for t…

    JavaScript 87 30

  6. ncbi_searchncbi_searchPublic

    This script uses NCBI's Entrez Programming Utilities to perform searches of NCBI databases. This script can return either the complete database records, or the IDs of the records.

    Perl 8 4