phyletica

A python package for summarizing the output of Ecoevolity

Assessing the behavior of hyper priors on parameters of the prior on event times.

Estimating evolutionary coevality

Experimenting with new models of shared evolutionary events among taxa.

phyletica.github.io

A repo for building a Docker image running ecoevolity

TeX files for the Phyletica Lab project at http://phyletica.org/codiv-sanger-bake-off

Comparing approximate and full-likelihood approaches to estimating temporal clustering of divergence times among taxa.

Machine learning experiments with state-dependent birth-death models with shared and multifurcating divergences