Update docstrings to improve consistency - #764

Merged
jan-janssen merged 1 commit into
mainfrom
docstring_updates
Jul 28, 2025
Merged

Update docstrings to improve consistency#764
jan-janssen merged 1 commit into
mainfrom
docstring_updates

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@jan-janssenjan-janssen commented Jul 28, 2025

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Summary by CodeRabbit

  • Documentation

    • Improved and clarified documentation for resource configuration parameters across multiple components, providing detailed descriptions of expected keys, types, and purposes.
    • Updated terminology for consistency (e.g., gpus_per_worker to gpus_per_core, oversubscribe to openmpi_oversubscribe).
    • Added explanations for new resource dictionary keys such as slurm_cmd_args and error_log_file.
  • Refactor

    • Renamed a constructor parameter for consistency (oversubscribe to openmpi_oversubscribe) in one component.

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Walkthrough

This update standardizes and enhances the documentation for the resource_dict parameter in several executor and scheduler components, clarifying expected keys, types, and their purposes. Additionally, a parameter in the SubprocessSpawner constructor is renamed for consistency. No logic or control flow changes are introduced.

Changes

Cohort / File(s)Change Summary
Docstring Enhancements: resource_dict
executorlib/executor/base.py, executorlib/task_scheduler/base.py, executorlib/task_scheduler/interactive/blockallocation.py, executorlib/standalone/serialize.py
Updated the resource_dict parameter docstrings to provide detailed, structured descriptions of expected keys, types, and default values. Clarified and standardized terminology (e.g., gpus_per_core, openmpi_oversubscribe, slurm_cmd_args, error_log_file). No changes to logic or function signatures.
Parameter Rename: Spawner Consistency
executorlib/standalone/interactive/spawner.py
Renamed the constructor parameter from oversubscribe to openmpi_oversubscribe in SubprocessSpawner to align with the naming convention used in the base class. Updated documentation and superclass constructor call accordingly. No changes to logic or control flow.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

Poem

In burrows deep, with docs anew,
The rabbits tidy what users view.
With keys and types now crystal clear,
Resource requests bring no more fear.
A tweak, a fix, a naming delight—
Our code hops forward, ever bright! 🐇✨

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Actionable comments posted: 1

🔭 Outside diff range comments (1)
executorlib/standalone/interactive/spawner.py (1)

63-77: Renaming oversubscribe silently breaks external callers – provide a compatibility shim

openmpi_oversubscribe is a clearer name, but removing the old oversubscribe parameter is a breaking change for anyone instantiating SubprocessSpawner directly or passing the key through factory code.

Add a backwards-compatibility alias that raises a DeprecationWarning for one release cycle.

 def __init__(
self,
cwd: Optional[str] = None,
cores: int = 1,
- openmpi_oversubscribe: bool = False,+ openmpi_oversubscribe: bool = False,
threads_per_core: int = 1,
+ # Deprecated – keep until vX.Y+ oversubscribe: Optional[bool] = None,
):
@@
- super().__init__(- cwd=cwd,- cores=cores,- openmpi_oversubscribe=openmpi_oversubscribe,- )+ if oversubscribe is not None:+ import warnings+ warnings.warn(+ "`oversubscribe` is deprecated; use `openmpi_oversubscribe`",+ DeprecationWarning,+ stacklevel=2,+ )+ openmpi_oversubscribe = oversubscribe++ super().__init__(cwd=cwd, cores=cores, openmpi_oversubscribe=openmpi_oversubscribe)

This prevents hard runtime failures while still nudging users toward the new name.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 3b8627c and f9b4da7.

📒 Files selected for processing (5)
  • executorlib/executor/base.py (1 hunks)
  • executorlib/standalone/interactive/spawner.py (1 hunks)
  • executorlib/standalone/serialize.py (1 hunks)
  • executorlib/task_scheduler/base.py (1 hunks)
  • executorlib/task_scheduler/interactive/blockallocation.py (1 hunks)
🔇 Additional comments (3)
executorlib/executor/base.py (1)

71-80: Docstring enrichment aligns with resource_dict spec – looks good

The expanded description is clear and consistent with the other modules.

executorlib/standalone/serialize.py (1)

45-54: Docstring update is clear and consistent

The new key list mirrors the executor and task-scheduler docs, removing ambiguity about GPU and oversubscribe semantics.

executorlib/task_scheduler/interactive/blockallocation.py (1)

116-125: Docstring harmonisation acknowledged

The parameter list now matches the rest of the codebase – no further action needed.

Comment on lines +90 to +99
resource_dict (dict): A dictionary of resources required by the task. With the following keys:
- cores (int): number of MPI cores to be used for each function call
- threads_per_core (int): number of OpenMP threads to be used for each function call
- gpus_per_core (int): number of GPUs per worker - defaults to 0
- cwd (str/None): current working directory where the parallel python task is executed
- openmpi_oversubscribe (bool): adds the `--oversubscribe` command line flag (OpenMPI and
SLURM only) - default False
- slurm_cmd_args (list): Additional command line arguments for the srun call (SLURM only)
- error_log_file (str): Name of the error log file to use for storing exceptions raised
by the Python functions submitted to the Executor.

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💡 Verification agent

🧩 Analysis chain

Ensure check_resource_dict recognises gpus_per_core

The docstring now documents gpus_per_core, but executorlib.standalone.inputcheck.check_resource_dict historically expected gpus_per_worker. Verify the helper was updated accordingly to avoid false validation errors.


🏁 Script executed:

#!/bin/bash# Search for gpus_per_worker vs gpus_per_core in the input-check helper
fd inputcheck | xargs rg -n 'gpus_per_(worker|core)'

Length of output: 754


Update inputcheck to support gpus_per_core

The executorlib.standalone.inputcheck module still defines and tests:

  • check_gpus_per_worker(gpus_per_worker: int)
    File: executorlib/standalone/inputcheck.py (lines 30–38)
  • Calls in tests: tests/test_standalone_inputcheck.py (lines 5, 31–33)

These must be renamed to check_gpus_per_core(gpus_per_core: int) (and all related call sites in check_resource_dict) to match the updated docstring in executorlib/task_scheduler/base.py and avoid validation errors.

Tagging as

🤖 Prompt for AI Agents
In executorlib/standalone/inputcheck.py around lines 30 to 38 and
tests/test_standalone_inputcheck.py around lines 5 and 31 to 33, rename the
function check_gpus_per_worker to check_gpus_per_core and update all related
call sites in the check_resource_dict function accordingly. This change aligns
the validation function and its usage with the updated resource_dict key
gpus_per_core in executorlib/task_scheduler/base.py, preventing validation
errors.

@codecov

codecovBot commented Jul 28, 2025

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.47%. Comparing base (3b8627c) to head (f9b4da7).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #764 +/- ##
=======================================
Coverage 97.47% 97.47% =======================================
Files 32 32 Lines 1423 1423 =======================================
Hits 1387 1387 Misses 36 36 

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@jan-janssen
jan-janssen merged commit 4adfb3d into mainJul 28, 2025
53 of 55 checks passed
@jan-janssen
jan-janssen deleted the docstring_updates branch July 28, 2025 07:06
@coderabbitaicoderabbitaiBot mentioned this pull request Sep 7, 2025
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Skip to content

Update docstrings to improve consistency - #764

Merged
jan-janssen merged 1 commit into
mainfrom
docstring_updates
Jul 28, 2025
Merged

Update docstrings to improve consistency#764
jan-janssen merged 1 commit into
mainfrom
docstring_updates

Conversation

@jan-janssen

@jan-janssenjan-janssen commented Jul 28, 2025

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Summary by CodeRabbit

  • Documentation

    • Improved and clarified documentation for resource configuration parameters across multiple components, providing detailed descriptions of expected keys, types, and purposes.
    • Updated terminology for consistency (e.g., gpus_per_worker to gpus_per_core, oversubscribe to openmpi_oversubscribe).
    • Added explanations for new resource dictionary keys such as slurm_cmd_args and error_log_file.
  • Refactor

    • Renamed a constructor parameter for consistency (oversubscribe to openmpi_oversubscribe) in one component.

@coderabbitai

coderabbitaiBot commented Jul 28, 2025

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Contributor

Walkthrough

This update standardizes and enhances the documentation for the resource_dict parameter in several executor and scheduler components, clarifying expected keys, types, and their purposes. Additionally, a parameter in the SubprocessSpawner constructor is renamed for consistency. No logic or control flow changes are introduced.

Changes

Cohort / File(s)Change Summary
Docstring Enhancements: resource_dict
executorlib/executor/base.py, executorlib/task_scheduler/base.py, executorlib/task_scheduler/interactive/blockallocation.py, executorlib/standalone/serialize.py
Updated the resource_dict parameter docstrings to provide detailed, structured descriptions of expected keys, types, and default values. Clarified and standardized terminology (e.g., gpus_per_core, openmpi_oversubscribe, slurm_cmd_args, error_log_file). No changes to logic or function signatures.
Parameter Rename: Spawner Consistency
executorlib/standalone/interactive/spawner.py
Renamed the constructor parameter from oversubscribe to openmpi_oversubscribe in SubprocessSpawner to align with the naming convention used in the base class. Updated documentation and superclass constructor call accordingly. No changes to logic or control flow.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

Poem

In burrows deep, with docs anew,
The rabbits tidy what users view.
With keys and types now crystal clear,
Resource requests bring no more fear.
A tweak, a fix, a naming delight—
Our code hops forward, ever bright! 🐇✨

✨ Finishing Touches
  • 📝 Generate Docstrings
🧪 Generate unit tests
  • Create PR with unit tests
  • Post copyable unit tests in a comment
  • Commit unit tests in branch docstring_updates

Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out.

❤️ Share
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Actionable comments posted: 1

🔭 Outside diff range comments (1)
executorlib/standalone/interactive/spawner.py (1)

63-77: Renaming oversubscribe silently breaks external callers – provide a compatibility shim

openmpi_oversubscribe is a clearer name, but removing the old oversubscribe parameter is a breaking change for anyone instantiating SubprocessSpawner directly or passing the key through factory code.

Add a backwards-compatibility alias that raises a DeprecationWarning for one release cycle.

 def __init__(
self,
cwd: Optional[str] = None,
cores: int = 1,
- openmpi_oversubscribe: bool = False,+ openmpi_oversubscribe: bool = False,
threads_per_core: int = 1,
+ # Deprecated – keep until vX.Y+ oversubscribe: Optional[bool] = None,
):
@@
- super().__init__(- cwd=cwd,- cores=cores,- openmpi_oversubscribe=openmpi_oversubscribe,- )+ if oversubscribe is not None:+ import warnings+ warnings.warn(+ "`oversubscribe` is deprecated; use `openmpi_oversubscribe`",+ DeprecationWarning,+ stacklevel=2,+ )+ openmpi_oversubscribe = oversubscribe++ super().__init__(cwd=cwd, cores=cores, openmpi_oversubscribe=openmpi_oversubscribe)

This prevents hard runtime failures while still nudging users toward the new name.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 3b8627c and f9b4da7.

📒 Files selected for processing (5)
  • executorlib/executor/base.py (1 hunks)
  • executorlib/standalone/interactive/spawner.py (1 hunks)
  • executorlib/standalone/serialize.py (1 hunks)
  • executorlib/task_scheduler/base.py (1 hunks)
  • executorlib/task_scheduler/interactive/blockallocation.py (1 hunks)
🔇 Additional comments (3)
executorlib/executor/base.py (1)

71-80: Docstring enrichment aligns with resource_dict spec – looks good

The expanded description is clear and consistent with the other modules.

executorlib/standalone/serialize.py (1)

45-54: Docstring update is clear and consistent

The new key list mirrors the executor and task-scheduler docs, removing ambiguity about GPU and oversubscribe semantics.

executorlib/task_scheduler/interactive/blockallocation.py (1)

116-125: Docstring harmonisation acknowledged

The parameter list now matches the rest of the codebase – no further action needed.

Comment on lines +90 to +99
resource_dict (dict): A dictionary of resources required by the task. With the following keys:
- cores (int): number of MPI cores to be used for each function call
- threads_per_core (int): number of OpenMP threads to be used for each function call
- gpus_per_core (int): number of GPUs per worker - defaults to 0
- cwd (str/None): current working directory where the parallel python task is executed
- openmpi_oversubscribe (bool): adds the `--oversubscribe` command line flag (OpenMPI and
SLURM only) - default False
- slurm_cmd_args (list): Additional command line arguments for the srun call (SLURM only)
- error_log_file (str): Name of the error log file to use for storing exceptions raised
by the Python functions submitted to the Executor.

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💡 Verification agent

🧩 Analysis chain

Ensure check_resource_dict recognises gpus_per_core

The docstring now documents gpus_per_core, but executorlib.standalone.inputcheck.check_resource_dict historically expected gpus_per_worker. Verify the helper was updated accordingly to avoid false validation errors.


🏁 Script executed:

#!/bin/bash# Search for gpus_per_worker vs gpus_per_core in the input-check helper
fd inputcheck | xargs rg -n 'gpus_per_(worker|core)'

Length of output: 754


Update inputcheck to support gpus_per_core

The executorlib.standalone.inputcheck module still defines and tests:

  • check_gpus_per_worker(gpus_per_worker: int)
    File: executorlib/standalone/inputcheck.py (lines 30–38)
  • Calls in tests: tests/test_standalone_inputcheck.py (lines 5, 31–33)

These must be renamed to check_gpus_per_core(gpus_per_core: int) (and all related call sites in check_resource_dict) to match the updated docstring in executorlib/task_scheduler/base.py and avoid validation errors.

Tagging as

🤖 Prompt for AI Agents
In executorlib/standalone/inputcheck.py around lines 30 to 38 and
tests/test_standalone_inputcheck.py around lines 5 and 31 to 33, rename the
function check_gpus_per_worker to check_gpus_per_core and update all related
call sites in the check_resource_dict function accordingly. This change aligns
the validation function and its usage with the updated resource_dict key
gpus_per_core in executorlib/task_scheduler/base.py, preventing validation
errors.

@codecov

codecovBot commented Jul 28, 2025

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.47%. Comparing base (3b8627c) to head (f9b4da7).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #764 +/- ##
=======================================
Coverage 97.47% 97.47% =======================================
Files 32 32 Lines 1423 1423 =======================================
Hits 1387 1387 Misses 36 36 

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@jan-janssen
jan-janssen merged commit 4adfb3d into mainJul 28, 2025
53 of 55 checks passed
@jan-janssen
jan-janssen deleted the docstring_updates branch July 28, 2025 07:06
@coderabbitaicoderabbitaiBot mentioned this pull request Sep 7, 2025
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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Force GitHub README to respect dark mode\n(function() {\n var style = document.createElement('style');\n style.textContent = '\n .markdown-body {\n color-scheme: dark light;\n }\n .markdown-body pre { background: #161b22 !important; }\n .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; }\n .markdown-body table th, .markdown-body table td { border-color: #30363d !important; }\n .markdown-body img { background: #0d1117; }\n .markdown-body blockquote { border-left-color: #8b949e; }\n .markdown-body hr { border-color: #30363d; }\n ';\n document.head.appendChild(style);\n})();", "GitHub Dark Mode README Fix"); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

Update docstrings to improve consistency - #764

Merged
jan-janssen merged 1 commit into
mainfrom
docstring_updates
Jul 28, 2025
Merged

Update docstrings to improve consistency#764
jan-janssen merged 1 commit into
mainfrom
docstring_updates

Conversation

@jan-janssen

@jan-janssenjan-janssen commented Jul 28, 2025

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Summary by CodeRabbit

  • Documentation

    • Improved and clarified documentation for resource configuration parameters across multiple components, providing detailed descriptions of expected keys, types, and purposes.
    • Updated terminology for consistency (e.g., gpus_per_worker to gpus_per_core, oversubscribe to openmpi_oversubscribe).
    • Added explanations for new resource dictionary keys such as slurm_cmd_args and error_log_file.
  • Refactor

    • Renamed a constructor parameter for consistency (oversubscribe to openmpi_oversubscribe) in one component.

@coderabbitai

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Walkthrough

This update standardizes and enhances the documentation for the resource_dict parameter in several executor and scheduler components, clarifying expected keys, types, and their purposes. Additionally, a parameter in the SubprocessSpawner constructor is renamed for consistency. No logic or control flow changes are introduced.

Changes

Cohort / File(s)Change Summary
Docstring Enhancements: resource_dict
executorlib/executor/base.py, executorlib/task_scheduler/base.py, executorlib/task_scheduler/interactive/blockallocation.py, executorlib/standalone/serialize.py
Updated the resource_dict parameter docstrings to provide detailed, structured descriptions of expected keys, types, and default values. Clarified and standardized terminology (e.g., gpus_per_core, openmpi_oversubscribe, slurm_cmd_args, error_log_file). No changes to logic or function signatures.
Parameter Rename: Spawner Consistency
executorlib/standalone/interactive/spawner.py
Renamed the constructor parameter from oversubscribe to openmpi_oversubscribe in SubprocessSpawner to align with the naming convention used in the base class. Updated documentation and superclass constructor call accordingly. No changes to logic or control flow.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

Poem

In burrows deep, with docs anew,
The rabbits tidy what users view.
With keys and types now crystal clear,
Resource requests bring no more fear.
A tweak, a fix, a naming delight—
Our code hops forward, ever bright! 🐇✨

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Actionable comments posted: 1

🔭 Outside diff range comments (1)
executorlib/standalone/interactive/spawner.py (1)

63-77: Renaming oversubscribe silently breaks external callers – provide a compatibility shim

openmpi_oversubscribe is a clearer name, but removing the old oversubscribe parameter is a breaking change for anyone instantiating SubprocessSpawner directly or passing the key through factory code.

Add a backwards-compatibility alias that raises a DeprecationWarning for one release cycle.

 def __init__(
self,
cwd: Optional[str] = None,
cores: int = 1,
- openmpi_oversubscribe: bool = False,+ openmpi_oversubscribe: bool = False,
threads_per_core: int = 1,
+ # Deprecated – keep until vX.Y+ oversubscribe: Optional[bool] = None,
):
@@
- super().__init__(- cwd=cwd,- cores=cores,- openmpi_oversubscribe=openmpi_oversubscribe,- )+ if oversubscribe is not None:+ import warnings+ warnings.warn(+ "`oversubscribe` is deprecated; use `openmpi_oversubscribe`",+ DeprecationWarning,+ stacklevel=2,+ )+ openmpi_oversubscribe = oversubscribe++ super().__init__(cwd=cwd, cores=cores, openmpi_oversubscribe=openmpi_oversubscribe)

This prevents hard runtime failures while still nudging users toward the new name.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 3b8627c and f9b4da7.

📒 Files selected for processing (5)
  • executorlib/executor/base.py (1 hunks)
  • executorlib/standalone/interactive/spawner.py (1 hunks)
  • executorlib/standalone/serialize.py (1 hunks)
  • executorlib/task_scheduler/base.py (1 hunks)
  • executorlib/task_scheduler/interactive/blockallocation.py (1 hunks)
🔇 Additional comments (3)
executorlib/executor/base.py (1)

71-80: Docstring enrichment aligns with resource_dict spec – looks good

The expanded description is clear and consistent with the other modules.

executorlib/standalone/serialize.py (1)

45-54: Docstring update is clear and consistent

The new key list mirrors the executor and task-scheduler docs, removing ambiguity about GPU and oversubscribe semantics.

executorlib/task_scheduler/interactive/blockallocation.py (1)

116-125: Docstring harmonisation acknowledged

The parameter list now matches the rest of the codebase – no further action needed.

Comment on lines +90 to +99
resource_dict (dict): A dictionary of resources required by the task. With the following keys:
- cores (int): number of MPI cores to be used for each function call
- threads_per_core (int): number of OpenMP threads to be used for each function call
- gpus_per_core (int): number of GPUs per worker - defaults to 0
- cwd (str/None): current working directory where the parallel python task is executed
- openmpi_oversubscribe (bool): adds the `--oversubscribe` command line flag (OpenMPI and
SLURM only) - default False
- slurm_cmd_args (list): Additional command line arguments for the srun call (SLURM only)
- error_log_file (str): Name of the error log file to use for storing exceptions raised
by the Python functions submitted to the Executor.

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💡 Verification agent

🧩 Analysis chain

Ensure check_resource_dict recognises gpus_per_core

The docstring now documents gpus_per_core, but executorlib.standalone.inputcheck.check_resource_dict historically expected gpus_per_worker. Verify the helper was updated accordingly to avoid false validation errors.


🏁 Script executed:

#!/bin/bash# Search for gpus_per_worker vs gpus_per_core in the input-check helper
fd inputcheck | xargs rg -n 'gpus_per_(worker|core)'

Length of output: 754


Update inputcheck to support gpus_per_core

The executorlib.standalone.inputcheck module still defines and tests:

  • check_gpus_per_worker(gpus_per_worker: int)
    File: executorlib/standalone/inputcheck.py (lines 30–38)
  • Calls in tests: tests/test_standalone_inputcheck.py (lines 5, 31–33)

These must be renamed to check_gpus_per_core(gpus_per_core: int) (and all related call sites in check_resource_dict) to match the updated docstring in executorlib/task_scheduler/base.py and avoid validation errors.

Tagging as

🤖 Prompt for AI Agents
In executorlib/standalone/inputcheck.py around lines 30 to 38 and
tests/test_standalone_inputcheck.py around lines 5 and 31 to 33, rename the
function check_gpus_per_worker to check_gpus_per_core and update all related
call sites in the check_resource_dict function accordingly. This change aligns
the validation function and its usage with the updated resource_dict key
gpus_per_core in executorlib/task_scheduler/base.py, preventing validation
errors.

@codecov

codecovBot commented Jul 28, 2025

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.47%. Comparing base (3b8627c) to head (f9b4da7).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #764 +/- ##
=======================================
Coverage 97.47% 97.47% =======================================
Files 32 32 Lines 1423 1423 =======================================
Hits 1387 1387 Misses 36 36 

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@jan-janssen
jan-janssen merged commit 4adfb3d into mainJul 28, 2025
53 of 55 checks passed
@jan-janssen
jan-janssen deleted the docstring_updates branch July 28, 2025 07:06
@coderabbitaicoderabbitaiBot mentioned this pull request Sep 7, 2025
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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Highlight search terms from Google/DuckDuckGo/Bing referrer\n(function() {\n var ref = document.referrer;\n var terms = [];\n \n if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) {\n var url = new URL(ref);\n var q = url.searchParams.get('q') || url.searchParams.get('p');\n if (q) {\n terms = q.split(/\\s+/).filter(function(t) { return t.length > 2; });\n }\n }\n \n if (terms.length === 0) return;\n \n var style = document.createElement('style');\n style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }';\n document.head.appendChild(style);\n \n function highlight(node) {\n if (node.nodeType === 3) { // text node\n var text = node.textContent;\n var found = false;\n terms.forEach(function(term) {\n var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\\]\\\\]/g, '\\\\') + ')', 'gi');\n if (regex.test(text)) {\n found = true;\n var frag = document.createDocumentFragment();\n var parts = text.split(regex);\n parts.forEach(function(part, i) {\n if (i % 2 === 0) {\n frag.appendChild(document.createTextNode(part));\n } else {\n var span = document.createElement('span');\n span.className = 'userscript-highlight';\n span.textContent = part;\n frag.appendChild(span);\n }\n });\n node.parentNode.replaceChild(frag, node);\n }\n });\n } else if (node.nodeType === 1 && node.childNodes) { // element\n var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT'];\n if (!skipTags.includes(node.tagName)) {\n Array.from(node.childNodes).forEach(highlight);\n }\n }\n }\n \n highlight(document.body);\n \n // Re-highlight on dynamic content\n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1 || node.nodeType === 3) highlight(node);\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Highlight Search Terms"); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

Update docstrings to improve consistency - #764

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jan-janssen merged 1 commit into
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docstring_updates
Jul 28, 2025
Merged

Update docstrings to improve consistency#764
jan-janssen merged 1 commit into
mainfrom
docstring_updates

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@jan-janssen

@jan-janssenjan-janssen commented Jul 28, 2025

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Summary by CodeRabbit

  • Documentation

    • Improved and clarified documentation for resource configuration parameters across multiple components, providing detailed descriptions of expected keys, types, and purposes.
    • Updated terminology for consistency (e.g., gpus_per_worker to gpus_per_core, oversubscribe to openmpi_oversubscribe).
    • Added explanations for new resource dictionary keys such as slurm_cmd_args and error_log_file.
  • Refactor

    • Renamed a constructor parameter for consistency (oversubscribe to openmpi_oversubscribe) in one component.

@coderabbitai

coderabbitaiBot commented Jul 28, 2025

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Contributor

Walkthrough

This update standardizes and enhances the documentation for the resource_dict parameter in several executor and scheduler components, clarifying expected keys, types, and their purposes. Additionally, a parameter in the SubprocessSpawner constructor is renamed for consistency. No logic or control flow changes are introduced.

Changes

Cohort / File(s)Change Summary
Docstring Enhancements: resource_dict
executorlib/executor/base.py, executorlib/task_scheduler/base.py, executorlib/task_scheduler/interactive/blockallocation.py, executorlib/standalone/serialize.py
Updated the resource_dict parameter docstrings to provide detailed, structured descriptions of expected keys, types, and default values. Clarified and standardized terminology (e.g., gpus_per_core, openmpi_oversubscribe, slurm_cmd_args, error_log_file). No changes to logic or function signatures.
Parameter Rename: Spawner Consistency
executorlib/standalone/interactive/spawner.py
Renamed the constructor parameter from oversubscribe to openmpi_oversubscribe in SubprocessSpawner to align with the naming convention used in the base class. Updated documentation and superclass constructor call accordingly. No changes to logic or control flow.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

Poem

In burrows deep, with docs anew,
The rabbits tidy what users view.
With keys and types now crystal clear,
Resource requests bring no more fear.
A tweak, a fix, a naming delight—
Our code hops forward, ever bright! 🐇✨

✨ Finishing Touches
  • 📝 Generate Docstrings
🧪 Generate unit tests
  • Create PR with unit tests
  • Post copyable unit tests in a comment
  • Commit unit tests in branch docstring_updates

Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out.

❤️ Share
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Actionable comments posted: 1

🔭 Outside diff range comments (1)
executorlib/standalone/interactive/spawner.py (1)

63-77: Renaming oversubscribe silently breaks external callers – provide a compatibility shim

openmpi_oversubscribe is a clearer name, but removing the old oversubscribe parameter is a breaking change for anyone instantiating SubprocessSpawner directly or passing the key through factory code.

Add a backwards-compatibility alias that raises a DeprecationWarning for one release cycle.

 def __init__(
self,
cwd: Optional[str] = None,
cores: int = 1,
- openmpi_oversubscribe: bool = False,+ openmpi_oversubscribe: bool = False,
threads_per_core: int = 1,
+ # Deprecated – keep until vX.Y+ oversubscribe: Optional[bool] = None,
):
@@
- super().__init__(- cwd=cwd,- cores=cores,- openmpi_oversubscribe=openmpi_oversubscribe,- )+ if oversubscribe is not None:+ import warnings+ warnings.warn(+ "`oversubscribe` is deprecated; use `openmpi_oversubscribe`",+ DeprecationWarning,+ stacklevel=2,+ )+ openmpi_oversubscribe = oversubscribe++ super().__init__(cwd=cwd, cores=cores, openmpi_oversubscribe=openmpi_oversubscribe)

This prevents hard runtime failures while still nudging users toward the new name.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 3b8627c and f9b4da7.

📒 Files selected for processing (5)
  • executorlib/executor/base.py (1 hunks)
  • executorlib/standalone/interactive/spawner.py (1 hunks)
  • executorlib/standalone/serialize.py (1 hunks)
  • executorlib/task_scheduler/base.py (1 hunks)
  • executorlib/task_scheduler/interactive/blockallocation.py (1 hunks)
🔇 Additional comments (3)
executorlib/executor/base.py (1)

71-80: Docstring enrichment aligns with resource_dict spec – looks good

The expanded description is clear and consistent with the other modules.

executorlib/standalone/serialize.py (1)

45-54: Docstring update is clear and consistent

The new key list mirrors the executor and task-scheduler docs, removing ambiguity about GPU and oversubscribe semantics.

executorlib/task_scheduler/interactive/blockallocation.py (1)

116-125: Docstring harmonisation acknowledged

The parameter list now matches the rest of the codebase – no further action needed.

Comment on lines +90 to +99
resource_dict (dict): A dictionary of resources required by the task. With the following keys:
- cores (int): number of MPI cores to be used for each function call
- threads_per_core (int): number of OpenMP threads to be used for each function call
- gpus_per_core (int): number of GPUs per worker - defaults to 0
- cwd (str/None): current working directory where the parallel python task is executed
- openmpi_oversubscribe (bool): adds the `--oversubscribe` command line flag (OpenMPI and
SLURM only) - default False
- slurm_cmd_args (list): Additional command line arguments for the srun call (SLURM only)
- error_log_file (str): Name of the error log file to use for storing exceptions raised
by the Python functions submitted to the Executor.

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💡 Verification agent

🧩 Analysis chain

Ensure check_resource_dict recognises gpus_per_core

The docstring now documents gpus_per_core, but executorlib.standalone.inputcheck.check_resource_dict historically expected gpus_per_worker. Verify the helper was updated accordingly to avoid false validation errors.


🏁 Script executed:

#!/bin/bash# Search for gpus_per_worker vs gpus_per_core in the input-check helper
fd inputcheck | xargs rg -n 'gpus_per_(worker|core)'

Length of output: 754


Update inputcheck to support gpus_per_core

The executorlib.standalone.inputcheck module still defines and tests:

  • check_gpus_per_worker(gpus_per_worker: int)
    File: executorlib/standalone/inputcheck.py (lines 30–38)
  • Calls in tests: tests/test_standalone_inputcheck.py (lines 5, 31–33)

These must be renamed to check_gpus_per_core(gpus_per_core: int) (and all related call sites in check_resource_dict) to match the updated docstring in executorlib/task_scheduler/base.py and avoid validation errors.

Tagging as

🤖 Prompt for AI Agents
In executorlib/standalone/inputcheck.py around lines 30 to 38 and
tests/test_standalone_inputcheck.py around lines 5 and 31 to 33, rename the
function check_gpus_per_worker to check_gpus_per_core and update all related
call sites in the check_resource_dict function accordingly. This change aligns
the validation function and its usage with the updated resource_dict key
gpus_per_core in executorlib/task_scheduler/base.py, preventing validation
errors.

@codecov

codecovBot commented Jul 28, 2025

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.47%. Comparing base (3b8627c) to head (f9b4da7).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #764 +/- ##
=======================================
Coverage 97.47% 97.47% =======================================
Files 32 32 Lines 1423 1423 =======================================
Hits 1387 1387 Misses 36 36 

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@jan-janssen
jan-janssen merged commit 4adfb3d into mainJul 28, 2025
53 of 55 checks passed
@jan-janssen
jan-janssen deleted the docstring_updates branch July 28, 2025 07:06
@coderabbitaicoderabbitaiBot mentioned this pull request Sep 7, 2025
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@jan-janssen
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Strip utm_, fbclid, gclid, etc. from all links on page\n(function() {\n var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content',\n 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid',\n 'ref', 'ref_src', 'source', 'medium', 'campaign'];\n \n function cleanUrl(url) {\n try {\n var u = new URL(url, window.location.origin);\n var changed = false;\n trackingParams.forEach(function(p) {\n if (u.searchParams.has(p)) {\n u.searchParams.delete(p);\n changed = true;\n }\n });\n return changed ? u.toString() : url;\n } catch (e) {\n return url;\n }\n }\n \n function cleanLinks() {\n document.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n \n cleanLinks();\n \n var observer = new MutationObserver(function(mutations) {\n mutations.forEach(function(m) {\n m.addedNodes.forEach(function(node) {\n if (node.nodeType === 1) {\n if (node.tagName === 'A') cleanLinks();\n node.querySelectorAll('a[href]').forEach(function(a) {\n var clean = cleanUrl(a.href);\n if (clean !== a.href) a.href = clean;\n });\n }\n });\n });\n });\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "Remove Tracking Parameters from Links"); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + '
Skip to content

Update docstrings to improve consistency - #764

Merged
jan-janssen merged 1 commit into
mainfrom
docstring_updates
Jul 28, 2025
Merged

Update docstrings to improve consistency#764
jan-janssen merged 1 commit into
mainfrom
docstring_updates

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@jan-janssenjan-janssen commented Jul 28, 2025

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Summary by CodeRabbit

  • Documentation

    • Improved and clarified documentation for resource configuration parameters across multiple components, providing detailed descriptions of expected keys, types, and purposes.
    • Updated terminology for consistency (e.g., gpus_per_worker to gpus_per_core, oversubscribe to openmpi_oversubscribe).
    • Added explanations for new resource dictionary keys such as slurm_cmd_args and error_log_file.
  • Refactor

    • Renamed a constructor parameter for consistency (oversubscribe to openmpi_oversubscribe) in one component.

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Walkthrough

This update standardizes and enhances the documentation for the resource_dict parameter in several executor and scheduler components, clarifying expected keys, types, and their purposes. Additionally, a parameter in the SubprocessSpawner constructor is renamed for consistency. No logic or control flow changes are introduced.

Changes

Cohort / File(s)Change Summary
Docstring Enhancements: resource_dict
executorlib/executor/base.py, executorlib/task_scheduler/base.py, executorlib/task_scheduler/interactive/blockallocation.py, executorlib/standalone/serialize.py
Updated the resource_dict parameter docstrings to provide detailed, structured descriptions of expected keys, types, and default values. Clarified and standardized terminology (e.g., gpus_per_core, openmpi_oversubscribe, slurm_cmd_args, error_log_file). No changes to logic or function signatures.
Parameter Rename: Spawner Consistency
executorlib/standalone/interactive/spawner.py
Renamed the constructor parameter from oversubscribe to openmpi_oversubscribe in SubprocessSpawner to align with the naming convention used in the base class. Updated documentation and superclass constructor call accordingly. No changes to logic or control flow.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

Poem

In burrows deep, with docs anew,
The rabbits tidy what users view.
With keys and types now crystal clear,
Resource requests bring no more fear.
A tweak, a fix, a naming delight—
Our code hops forward, ever bright! 🐇✨

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Actionable comments posted: 1

🔭 Outside diff range comments (1)
executorlib/standalone/interactive/spawner.py (1)

63-77: Renaming oversubscribe silently breaks external callers – provide a compatibility shim

openmpi_oversubscribe is a clearer name, but removing the old oversubscribe parameter is a breaking change for anyone instantiating SubprocessSpawner directly or passing the key through factory code.

Add a backwards-compatibility alias that raises a DeprecationWarning for one release cycle.

 def __init__(
self,
cwd: Optional[str] = None,
cores: int = 1,
- openmpi_oversubscribe: bool = False,+ openmpi_oversubscribe: bool = False,
threads_per_core: int = 1,
+ # Deprecated – keep until vX.Y+ oversubscribe: Optional[bool] = None,
):
@@
- super().__init__(- cwd=cwd,- cores=cores,- openmpi_oversubscribe=openmpi_oversubscribe,- )+ if oversubscribe is not None:+ import warnings+ warnings.warn(+ "`oversubscribe` is deprecated; use `openmpi_oversubscribe`",+ DeprecationWarning,+ stacklevel=2,+ )+ openmpi_oversubscribe = oversubscribe++ super().__init__(cwd=cwd, cores=cores, openmpi_oversubscribe=openmpi_oversubscribe)

This prevents hard runtime failures while still nudging users toward the new name.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 3b8627c and f9b4da7.

📒 Files selected for processing (5)
  • executorlib/executor/base.py (1 hunks)
  • executorlib/standalone/interactive/spawner.py (1 hunks)
  • executorlib/standalone/serialize.py (1 hunks)
  • executorlib/task_scheduler/base.py (1 hunks)
  • executorlib/task_scheduler/interactive/blockallocation.py (1 hunks)
🔇 Additional comments (3)
executorlib/executor/base.py (1)

71-80: Docstring enrichment aligns with resource_dict spec – looks good

The expanded description is clear and consistent with the other modules.

executorlib/standalone/serialize.py (1)

45-54: Docstring update is clear and consistent

The new key list mirrors the executor and task-scheduler docs, removing ambiguity about GPU and oversubscribe semantics.

executorlib/task_scheduler/interactive/blockallocation.py (1)

116-125: Docstring harmonisation acknowledged

The parameter list now matches the rest of the codebase – no further action needed.

Comment on lines +90 to +99
resource_dict (dict): A dictionary of resources required by the task. With the following keys:
- cores (int): number of MPI cores to be used for each function call
- threads_per_core (int): number of OpenMP threads to be used for each function call
- gpus_per_core (int): number of GPUs per worker - defaults to 0
- cwd (str/None): current working directory where the parallel python task is executed
- openmpi_oversubscribe (bool): adds the `--oversubscribe` command line flag (OpenMPI and
SLURM only) - default False
- slurm_cmd_args (list): Additional command line arguments for the srun call (SLURM only)
- error_log_file (str): Name of the error log file to use for storing exceptions raised
by the Python functions submitted to the Executor.

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💡 Verification agent

🧩 Analysis chain

Ensure check_resource_dict recognises gpus_per_core

The docstring now documents gpus_per_core, but executorlib.standalone.inputcheck.check_resource_dict historically expected gpus_per_worker. Verify the helper was updated accordingly to avoid false validation errors.


🏁 Script executed:

#!/bin/bash# Search for gpus_per_worker vs gpus_per_core in the input-check helper
fd inputcheck | xargs rg -n 'gpus_per_(worker|core)'

Length of output: 754


Update inputcheck to support gpus_per_core

The executorlib.standalone.inputcheck module still defines and tests:

  • check_gpus_per_worker(gpus_per_worker: int)
    File: executorlib/standalone/inputcheck.py (lines 30–38)
  • Calls in tests: tests/test_standalone_inputcheck.py (lines 5, 31–33)

These must be renamed to check_gpus_per_core(gpus_per_core: int) (and all related call sites in check_resource_dict) to match the updated docstring in executorlib/task_scheduler/base.py and avoid validation errors.

Tagging as

🤖 Prompt for AI Agents
In executorlib/standalone/inputcheck.py around lines 30 to 38 and
tests/test_standalone_inputcheck.py around lines 5 and 31 to 33, rename the
function check_gpus_per_worker to check_gpus_per_core and update all related
call sites in the check_resource_dict function accordingly. This change aligns
the validation function and its usage with the updated resource_dict key
gpus_per_core in executorlib/task_scheduler/base.py, preventing validation
errors.

@codecov

codecovBot commented Jul 28, 2025

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.47%. Comparing base (3b8627c) to head (f9b4da7).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #764 +/- ##
=======================================
Coverage 97.47% 97.47% =======================================
Files 32 32 Lines 1423 1423 =======================================
Hits 1387 1387 Misses 36 36 

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@jan-janssen
jan-janssen merged commit 4adfb3d into mainJul 28, 2025
53 of 55 checks passed
@jan-janssen
jan-janssen deleted the docstring_updates branch July 28, 2025 07:06
@coderabbitaicoderabbitaiBot mentioned this pull request Sep 7, 2025
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, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Auto-enable theater mode on YouTube\n(function() {\n function tryTheater() {\n var btn = document.querySelector('button[aria-label=\"Theater mode\"], ytd-player #player button[title=\"Theater mode\"]');\n if (btn && !btn.classList.contains('activated')) {\n btn.click();\n }\n }\n \n // Try immediately\n tryTheater();\n \n // Try after navigation (SPA)\n var lastUrl = location.href;\n setInterval(function() {\n if (location.href !== lastUrl) {\n lastUrl = location.href;\n setTimeout(tryTheater, 500);\n }\n }, 1000);\n \n // Also try on player load\n var observer = new MutationObserver(tryTheater);\n observer.observe(document.body, { childList: true, subtree: true });\n})();", "YouTube Theater Mode Default"); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

Update docstrings to improve consistency - #764

Merged
jan-janssen merged 1 commit into
mainfrom
docstring_updates
Jul 28, 2025
Merged

Update docstrings to improve consistency#764
jan-janssen merged 1 commit into
mainfrom
docstring_updates

Conversation

@jan-janssen

@jan-janssenjan-janssen commented Jul 28, 2025

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Summary by CodeRabbit

  • Documentation

    • Improved and clarified documentation for resource configuration parameters across multiple components, providing detailed descriptions of expected keys, types, and purposes.
    • Updated terminology for consistency (e.g., gpus_per_worker to gpus_per_core, oversubscribe to openmpi_oversubscribe).
    • Added explanations for new resource dictionary keys such as slurm_cmd_args and error_log_file.
  • Refactor

    • Renamed a constructor parameter for consistency (oversubscribe to openmpi_oversubscribe) in one component.

@coderabbitai

coderabbitaiBot commented Jul 28, 2025

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Walkthrough

This update standardizes and enhances the documentation for the resource_dict parameter in several executor and scheduler components, clarifying expected keys, types, and their purposes. Additionally, a parameter in the SubprocessSpawner constructor is renamed for consistency. No logic or control flow changes are introduced.

Changes

Cohort / File(s)Change Summary
Docstring Enhancements: resource_dict
executorlib/executor/base.py, executorlib/task_scheduler/base.py, executorlib/task_scheduler/interactive/blockallocation.py, executorlib/standalone/serialize.py
Updated the resource_dict parameter docstrings to provide detailed, structured descriptions of expected keys, types, and default values. Clarified and standardized terminology (e.g., gpus_per_core, openmpi_oversubscribe, slurm_cmd_args, error_log_file). No changes to logic or function signatures.
Parameter Rename: Spawner Consistency
executorlib/standalone/interactive/spawner.py
Renamed the constructor parameter from oversubscribe to openmpi_oversubscribe in SubprocessSpawner to align with the naming convention used in the base class. Updated documentation and superclass constructor call accordingly. No changes to logic or control flow.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

Poem

In burrows deep, with docs anew,
The rabbits tidy what users view.
With keys and types now crystal clear,
Resource requests bring no more fear.
A tweak, a fix, a naming delight—
Our code hops forward, ever bright! 🐇✨

✨ Finishing Touches
  • 📝 Generate Docstrings
🧪 Generate unit tests
  • Create PR with unit tests
  • Post copyable unit tests in a comment
  • Commit unit tests in branch docstring_updates

Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out.

❤️ Share
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Actionable comments posted: 1

🔭 Outside diff range comments (1)
executorlib/standalone/interactive/spawner.py (1)

63-77: Renaming oversubscribe silently breaks external callers – provide a compatibility shim

openmpi_oversubscribe is a clearer name, but removing the old oversubscribe parameter is a breaking change for anyone instantiating SubprocessSpawner directly or passing the key through factory code.

Add a backwards-compatibility alias that raises a DeprecationWarning for one release cycle.

 def __init__(
self,
cwd: Optional[str] = None,
cores: int = 1,
- openmpi_oversubscribe: bool = False,+ openmpi_oversubscribe: bool = False,
threads_per_core: int = 1,
+ # Deprecated – keep until vX.Y+ oversubscribe: Optional[bool] = None,
):
@@
- super().__init__(- cwd=cwd,- cores=cores,- openmpi_oversubscribe=openmpi_oversubscribe,- )+ if oversubscribe is not None:+ import warnings+ warnings.warn(+ "`oversubscribe` is deprecated; use `openmpi_oversubscribe`",+ DeprecationWarning,+ stacklevel=2,+ )+ openmpi_oversubscribe = oversubscribe++ super().__init__(cwd=cwd, cores=cores, openmpi_oversubscribe=openmpi_oversubscribe)

This prevents hard runtime failures while still nudging users toward the new name.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 3b8627c and f9b4da7.

📒 Files selected for processing (5)
  • executorlib/executor/base.py (1 hunks)
  • executorlib/standalone/interactive/spawner.py (1 hunks)
  • executorlib/standalone/serialize.py (1 hunks)
  • executorlib/task_scheduler/base.py (1 hunks)
  • executorlib/task_scheduler/interactive/blockallocation.py (1 hunks)
🔇 Additional comments (3)
executorlib/executor/base.py (1)

71-80: Docstring enrichment aligns with resource_dict spec – looks good

The expanded description is clear and consistent with the other modules.

executorlib/standalone/serialize.py (1)

45-54: Docstring update is clear and consistent

The new key list mirrors the executor and task-scheduler docs, removing ambiguity about GPU and oversubscribe semantics.

executorlib/task_scheduler/interactive/blockallocation.py (1)

116-125: Docstring harmonisation acknowledged

The parameter list now matches the rest of the codebase – no further action needed.

Comment on lines +90 to +99
resource_dict (dict): A dictionary of resources required by the task. With the following keys:
- cores (int): number of MPI cores to be used for each function call
- threads_per_core (int): number of OpenMP threads to be used for each function call
- gpus_per_core (int): number of GPUs per worker - defaults to 0
- cwd (str/None): current working directory where the parallel python task is executed
- openmpi_oversubscribe (bool): adds the `--oversubscribe` command line flag (OpenMPI and
SLURM only) - default False
- slurm_cmd_args (list): Additional command line arguments for the srun call (SLURM only)
- error_log_file (str): Name of the error log file to use for storing exceptions raised
by the Python functions submitted to the Executor.

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Choose a reason for hiding this comment

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💡 Verification agent

🧩 Analysis chain

Ensure check_resource_dict recognises gpus_per_core

The docstring now documents gpus_per_core, but executorlib.standalone.inputcheck.check_resource_dict historically expected gpus_per_worker. Verify the helper was updated accordingly to avoid false validation errors.


🏁 Script executed:

#!/bin/bash# Search for gpus_per_worker vs gpus_per_core in the input-check helper
fd inputcheck | xargs rg -n 'gpus_per_(worker|core)'

Length of output: 754


Update inputcheck to support gpus_per_core

The executorlib.standalone.inputcheck module still defines and tests:

  • check_gpus_per_worker(gpus_per_worker: int)
    File: executorlib/standalone/inputcheck.py (lines 30–38)
  • Calls in tests: tests/test_standalone_inputcheck.py (lines 5, 31–33)

These must be renamed to check_gpus_per_core(gpus_per_core: int) (and all related call sites in check_resource_dict) to match the updated docstring in executorlib/task_scheduler/base.py and avoid validation errors.

Tagging as

🤖 Prompt for AI Agents
In executorlib/standalone/inputcheck.py around lines 30 to 38 and
tests/test_standalone_inputcheck.py around lines 5 and 31 to 33, rename the
function check_gpus_per_worker to check_gpus_per_core and update all related
call sites in the check_resource_dict function accordingly. This change aligns
the validation function and its usage with the updated resource_dict key
gpus_per_core in executorlib/task_scheduler/base.py, preventing validation
errors.

@codecov

codecovBot commented Jul 28, 2025

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.47%. Comparing base (3b8627c) to head (f9b4da7).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #764 +/- ##
=======================================
Coverage 97.47% 97.47% =======================================
Files 32 32 Lines 1423 1423 =======================================
Hits 1387 1387 Misses 36 36 

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@jan-janssen
jan-janssen merged commit 4adfb3d into mainJul 28, 2025
53 of 55 checks passed
@jan-janssen
jan-janssen deleted the docstring_updates branch July 28, 2025 07:06
@coderabbitaicoderabbitaiBot mentioned this pull request Sep 7, 2025
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Successfully merging this pull request may close these issues.

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@jan-janssen
, 'i'); if (__m === '*' || __re.test(location.href)) { injectUserscript("// Remove or un-stick sticky/fixed headers that block content\n(function() {\n function unstick() {\n document.querySelectorAll('header, nav, [role=\"banner\"], .header, .navbar, .sticky, .fixed-top, [style*=\"position: fixed\"], [style*=\"position:sticky\"]').forEach(function(el) {\n if (el.style.position === 'fixed' || el.style.position === 'sticky' || \n getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') {\n el.style.position = 'static';\n el.style.top = 'auto';\n el.style.zIndex = 'auto';\n }\n });\n }\n \n unstick();\n \n var observer = new MutationObserver(unstick);\n observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] });\n})();", "Kill Sticky Headers"); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + '
Skip to content

Update docstrings to improve consistency - #764

Merged
jan-janssen merged 1 commit into
mainfrom
docstring_updates
Jul 28, 2025
Merged

Update docstrings to improve consistency#764
jan-janssen merged 1 commit into
mainfrom
docstring_updates

Conversation

@jan-janssen

@jan-janssenjan-janssen commented Jul 28, 2025

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Summary by CodeRabbit

  • Documentation

    • Improved and clarified documentation for resource configuration parameters across multiple components, providing detailed descriptions of expected keys, types, and purposes.
    • Updated terminology for consistency (e.g., gpus_per_worker to gpus_per_core, oversubscribe to openmpi_oversubscribe).
    • Added explanations for new resource dictionary keys such as slurm_cmd_args and error_log_file.
  • Refactor

    • Renamed a constructor parameter for consistency (oversubscribe to openmpi_oversubscribe) in one component.

@coderabbitai

coderabbitaiBot commented Jul 28, 2025

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Walkthrough

This update standardizes and enhances the documentation for the resource_dict parameter in several executor and scheduler components, clarifying expected keys, types, and their purposes. Additionally, a parameter in the SubprocessSpawner constructor is renamed for consistency. No logic or control flow changes are introduced.

Changes

Cohort / File(s)Change Summary
Docstring Enhancements: resource_dict
executorlib/executor/base.py, executorlib/task_scheduler/base.py, executorlib/task_scheduler/interactive/blockallocation.py, executorlib/standalone/serialize.py
Updated the resource_dict parameter docstrings to provide detailed, structured descriptions of expected keys, types, and default values. Clarified and standardized terminology (e.g., gpus_per_core, openmpi_oversubscribe, slurm_cmd_args, error_log_file). No changes to logic or function signatures.
Parameter Rename: Spawner Consistency
executorlib/standalone/interactive/spawner.py
Renamed the constructor parameter from oversubscribe to openmpi_oversubscribe in SubprocessSpawner to align with the naming convention used in the base class. Updated documentation and superclass constructor call accordingly. No changes to logic or control flow.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

Poem

In burrows deep, with docs anew,
The rabbits tidy what users view.
With keys and types now crystal clear,
Resource requests bring no more fear.
A tweak, a fix, a naming delight—
Our code hops forward, ever bright! 🐇✨

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Actionable comments posted: 1

🔭 Outside diff range comments (1)
executorlib/standalone/interactive/spawner.py (1)

63-77: Renaming oversubscribe silently breaks external callers – provide a compatibility shim

openmpi_oversubscribe is a clearer name, but removing the old oversubscribe parameter is a breaking change for anyone instantiating SubprocessSpawner directly or passing the key through factory code.

Add a backwards-compatibility alias that raises a DeprecationWarning for one release cycle.

 def __init__(
self,
cwd: Optional[str] = None,
cores: int = 1,
- openmpi_oversubscribe: bool = False,+ openmpi_oversubscribe: bool = False,
threads_per_core: int = 1,
+ # Deprecated – keep until vX.Y+ oversubscribe: Optional[bool] = None,
):
@@
- super().__init__(- cwd=cwd,- cores=cores,- openmpi_oversubscribe=openmpi_oversubscribe,- )+ if oversubscribe is not None:+ import warnings+ warnings.warn(+ "`oversubscribe` is deprecated; use `openmpi_oversubscribe`",+ DeprecationWarning,+ stacklevel=2,+ )+ openmpi_oversubscribe = oversubscribe++ super().__init__(cwd=cwd, cores=cores, openmpi_oversubscribe=openmpi_oversubscribe)

This prevents hard runtime failures while still nudging users toward the new name.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 3b8627c and f9b4da7.

📒 Files selected for processing (5)
  • executorlib/executor/base.py (1 hunks)
  • executorlib/standalone/interactive/spawner.py (1 hunks)
  • executorlib/standalone/serialize.py (1 hunks)
  • executorlib/task_scheduler/base.py (1 hunks)
  • executorlib/task_scheduler/interactive/blockallocation.py (1 hunks)
🔇 Additional comments (3)
executorlib/executor/base.py (1)

71-80: Docstring enrichment aligns with resource_dict spec – looks good

The expanded description is clear and consistent with the other modules.

executorlib/standalone/serialize.py (1)

45-54: Docstring update is clear and consistent

The new key list mirrors the executor and task-scheduler docs, removing ambiguity about GPU and oversubscribe semantics.

executorlib/task_scheduler/interactive/blockallocation.py (1)

116-125: Docstring harmonisation acknowledged

The parameter list now matches the rest of the codebase – no further action needed.

Comment on lines +90 to +99
resource_dict (dict): A dictionary of resources required by the task. With the following keys:
- cores (int): number of MPI cores to be used for each function call
- threads_per_core (int): number of OpenMP threads to be used for each function call
- gpus_per_core (int): number of GPUs per worker - defaults to 0
- cwd (str/None): current working directory where the parallel python task is executed
- openmpi_oversubscribe (bool): adds the `--oversubscribe` command line flag (OpenMPI and
SLURM only) - default False
- slurm_cmd_args (list): Additional command line arguments for the srun call (SLURM only)
- error_log_file (str): Name of the error log file to use for storing exceptions raised
by the Python functions submitted to the Executor.

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💡 Verification agent

🧩 Analysis chain

Ensure check_resource_dict recognises gpus_per_core

The docstring now documents gpus_per_core, but executorlib.standalone.inputcheck.check_resource_dict historically expected gpus_per_worker. Verify the helper was updated accordingly to avoid false validation errors.


🏁 Script executed:

#!/bin/bash# Search for gpus_per_worker vs gpus_per_core in the input-check helper
fd inputcheck | xargs rg -n 'gpus_per_(worker|core)'

Length of output: 754


Update inputcheck to support gpus_per_core

The executorlib.standalone.inputcheck module still defines and tests:

  • check_gpus_per_worker(gpus_per_worker: int)
    File: executorlib/standalone/inputcheck.py (lines 30–38)
  • Calls in tests: tests/test_standalone_inputcheck.py (lines 5, 31–33)

These must be renamed to check_gpus_per_core(gpus_per_core: int) (and all related call sites in check_resource_dict) to match the updated docstring in executorlib/task_scheduler/base.py and avoid validation errors.

Tagging as

🤖 Prompt for AI Agents
In executorlib/standalone/inputcheck.py around lines 30 to 38 and
tests/test_standalone_inputcheck.py around lines 5 and 31 to 33, rename the
function check_gpus_per_worker to check_gpus_per_core and update all related
call sites in the check_resource_dict function accordingly. This change aligns
the validation function and its usage with the updated resource_dict key
gpus_per_core in executorlib/task_scheduler/base.py, preventing validation
errors.

@codecov

codecovBot commented Jul 28, 2025

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.47%. Comparing base (3b8627c) to head (f9b4da7).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #764 +/- ##
=======================================
Coverage 97.47% 97.47% =======================================
Files 32 32 Lines 1423 1423 =======================================
Hits 1387 1387 Misses 36 36 

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@jan-janssen
jan-janssen merged commit 4adfb3d into mainJul 28, 2025
53 of 55 checks passed
@jan-janssen
jan-janssen deleted the docstring_updates branch July 28, 2025 07:06
@coderabbitaicoderabbitaiBot mentioned this pull request Sep 7, 2025
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Update docstrings to improve consistency - #764

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Update docstrings to improve consistency#764
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@jan-janssenjan-janssen commented Jul 28, 2025

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Summary by CodeRabbit

  • Documentation

    • Improved and clarified documentation for resource configuration parameters across multiple components, providing detailed descriptions of expected keys, types, and purposes.
    • Updated terminology for consistency (e.g., gpus_per_worker to gpus_per_core, oversubscribe to openmpi_oversubscribe).
    • Added explanations for new resource dictionary keys such as slurm_cmd_args and error_log_file.
  • Refactor

    • Renamed a constructor parameter for consistency (oversubscribe to openmpi_oversubscribe) in one component.

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Walkthrough

This update standardizes and enhances the documentation for the resource_dict parameter in several executor and scheduler components, clarifying expected keys, types, and their purposes. Additionally, a parameter in the SubprocessSpawner constructor is renamed for consistency. No logic or control flow changes are introduced.

Changes

Cohort / File(s)Change Summary
Docstring Enhancements: resource_dict
executorlib/executor/base.py, executorlib/task_scheduler/base.py, executorlib/task_scheduler/interactive/blockallocation.py, executorlib/standalone/serialize.py
Updated the resource_dict parameter docstrings to provide detailed, structured descriptions of expected keys, types, and default values. Clarified and standardized terminology (e.g., gpus_per_core, openmpi_oversubscribe, slurm_cmd_args, error_log_file). No changes to logic or function signatures.
Parameter Rename: Spawner Consistency
executorlib/standalone/interactive/spawner.py
Renamed the constructor parameter from oversubscribe to openmpi_oversubscribe in SubprocessSpawner to align with the naming convention used in the base class. Updated documentation and superclass constructor call accordingly. No changes to logic or control flow.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

Poem

In burrows deep, with docs anew,
The rabbits tidy what users view.
With keys and types now crystal clear,
Resource requests bring no more fear.
A tweak, a fix, a naming delight—
Our code hops forward, ever bright! 🐇✨

✨ Finishing Touches
  • 📝 Generate Docstrings
🧪 Generate unit tests
  • Create PR with unit tests
  • Post copyable unit tests in a comment
  • Commit unit tests in branch docstring_updates

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Actionable comments posted: 1

🔭 Outside diff range comments (1)
executorlib/standalone/interactive/spawner.py (1)

63-77: Renaming oversubscribe silently breaks external callers – provide a compatibility shim

openmpi_oversubscribe is a clearer name, but removing the old oversubscribe parameter is a breaking change for anyone instantiating SubprocessSpawner directly or passing the key through factory code.

Add a backwards-compatibility alias that raises a DeprecationWarning for one release cycle.

 def __init__(
self,
cwd: Optional[str] = None,
cores: int = 1,
- openmpi_oversubscribe: bool = False,+ openmpi_oversubscribe: bool = False,
threads_per_core: int = 1,
+ # Deprecated – keep until vX.Y+ oversubscribe: Optional[bool] = None,
):
@@
- super().__init__(- cwd=cwd,- cores=cores,- openmpi_oversubscribe=openmpi_oversubscribe,- )+ if oversubscribe is not None:+ import warnings+ warnings.warn(+ "`oversubscribe` is deprecated; use `openmpi_oversubscribe`",+ DeprecationWarning,+ stacklevel=2,+ )+ openmpi_oversubscribe = oversubscribe++ super().__init__(cwd=cwd, cores=cores, openmpi_oversubscribe=openmpi_oversubscribe)

This prevents hard runtime failures while still nudging users toward the new name.

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 3b8627c and f9b4da7.

📒 Files selected for processing (5)
  • executorlib/executor/base.py (1 hunks)
  • executorlib/standalone/interactive/spawner.py (1 hunks)
  • executorlib/standalone/serialize.py (1 hunks)
  • executorlib/task_scheduler/base.py (1 hunks)
  • executorlib/task_scheduler/interactive/blockallocation.py (1 hunks)
🔇 Additional comments (3)
executorlib/executor/base.py (1)

71-80: Docstring enrichment aligns with resource_dict spec – looks good

The expanded description is clear and consistent with the other modules.

executorlib/standalone/serialize.py (1)

45-54: Docstring update is clear and consistent

The new key list mirrors the executor and task-scheduler docs, removing ambiguity about GPU and oversubscribe semantics.

executorlib/task_scheduler/interactive/blockallocation.py (1)

116-125: Docstring harmonisation acknowledged

The parameter list now matches the rest of the codebase – no further action needed.

Comment on lines +90 to +99
resource_dict (dict): A dictionary of resources required by the task. With the following keys:
- cores (int): number of MPI cores to be used for each function call
- threads_per_core (int): number of OpenMP threads to be used for each function call
- gpus_per_core (int): number of GPUs per worker - defaults to 0
- cwd (str/None): current working directory where the parallel python task is executed
- openmpi_oversubscribe (bool): adds the `--oversubscribe` command line flag (OpenMPI and
SLURM only) - default False
- slurm_cmd_args (list): Additional command line arguments for the srun call (SLURM only)
- error_log_file (str): Name of the error log file to use for storing exceptions raised
by the Python functions submitted to the Executor.

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💡 Verification agent

🧩 Analysis chain

Ensure check_resource_dict recognises gpus_per_core

The docstring now documents gpus_per_core, but executorlib.standalone.inputcheck.check_resource_dict historically expected gpus_per_worker. Verify the helper was updated accordingly to avoid false validation errors.


🏁 Script executed:

#!/bin/bash# Search for gpus_per_worker vs gpus_per_core in the input-check helper
fd inputcheck | xargs rg -n 'gpus_per_(worker|core)'

Length of output: 754


Update inputcheck to support gpus_per_core

The executorlib.standalone.inputcheck module still defines and tests:

  • check_gpus_per_worker(gpus_per_worker: int)
    File: executorlib/standalone/inputcheck.py (lines 30–38)
  • Calls in tests: tests/test_standalone_inputcheck.py (lines 5, 31–33)

These must be renamed to check_gpus_per_core(gpus_per_core: int) (and all related call sites in check_resource_dict) to match the updated docstring in executorlib/task_scheduler/base.py and avoid validation errors.

Tagging as

🤖 Prompt for AI Agents
In executorlib/standalone/inputcheck.py around lines 30 to 38 and
tests/test_standalone_inputcheck.py around lines 5 and 31 to 33, rename the
function check_gpus_per_worker to check_gpus_per_core and update all related
call sites in the check_resource_dict function accordingly. This change aligns
the validation function and its usage with the updated resource_dict key
gpus_per_core in executorlib/task_scheduler/base.py, preventing validation
errors.

@codecov

codecovBot commented Jul 28, 2025

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.47%. Comparing base (3b8627c) to head (f9b4da7).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
@@ Coverage Diff @@## main #764 +/- ##
=======================================
Coverage 97.47% 97.47% =======================================
Files 32 32 Lines 1423 1423 =======================================
Hits 1387 1387 Misses 36 36 

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@jan-janssen
jan-janssen merged commit 4adfb3d into mainJul 28, 2025
53 of 55 checks passed
@jan-janssen
jan-janssen deleted the docstring_updates branch July 28, 2025 07:06
@coderabbitaicoderabbitaiBot mentioned this pull request Sep 7, 2025
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