zenodo-cli

CLI tool for managing metadata, searching records, and querying assets on Zenodo.

Wraps the Zenodo REST API for record lookup, community browsing, license search, and BI/reporting. Outputs machine-readable formats (JSON, CSV) for agent and pipeline consumption, or human-friendly tables for interactive use.

Install

Install script (macOS / Linux)

curl -fsSL https://raw.githubusercontent.com/ran-codes/zenodo-cli/main/scripts/install.sh | bash

Scoop (Windows)

## Install Scoop if you don't have it: https://scoop.sh# irm get.scoop.sh | iex
scoop bucket add zenodo-cli https://github.com/ran-codes/zenodo-cli
scoop install zenodo-cli

Manual download

Download the binaries for your platform from GitHub Releases and add them to your PATH.

Usage

# Store your API token (saved in OS keychain)
zenodo config set token <your-zenodo-token># List your records
zenodo records list
# Search published records
zenodo records search "climate data"# Get a specific record
zenodo records get 12345
# List all versions of a record
zenodo records versions 12345
# Search communities
zenodo communities list "ecology"# Search licenses
zenodo licenses search "creative commons"

Community records with usage stats

Output formats

Every command supports --output json|table|csv and --fields for column selection:

# JSON output (default when piped)
zenodo records list --output json
# CSV with specific fields
zenodo records list --output csv --fields id,title,doi
# Filter by community
zenodo records list --community my-org
# Auto-paginate all results
zenodo records list --community my-org --all

Multiple profiles

# Set up a sandbox profile
zenodo config set profiles.sandbox.base_url https://sandbox.zenodo.org/api
zenodo config use sandbox
zenodo config set token <sandbox-token># Switch back
zenodo config use production
# List profiles (* = active)
zenodo config profiles

Commands

Command	Description
records list	List your records and drafts
records search <query>	Search all published records
records get <id>	Get full record details
records versions <id>	List all versions of a record
communities list [query]	Search and list communities
licenses search [query]	Search available licenses
config set <key> <value>	Set config value (token goes to OS keychain)
config get <key>	Get a config value
config use <profile>	Switch active profile
config profiles	List all profiles
version	Print version and build info

Prerequisites

• A Zenodo API token

Creating a Zenodo API token

1. Log in at zenodo.org (or sandbox.zenodo.org for testing)
2. Go to Applications > Personal access tokens > New token
3. Give it a name and select the scopes you need (deposit:write, deposit:actions for future write features)
4. Copy the token and store it: zenodo config set token <token>

MCP Server (Claude Code integration)

zenodo-mcp is a second binary that exposes Zenodo tools via the Model Context Protocol, letting Claude Code interact with Zenodo directly.

Setup

After installing, add to your Claude Code MCP config (.mcp.json in your project root or ~/.claude.json):

{
"mcpServers": {
"zenodo": {
"command": "zenodo-mcp"
}
}
}

The MCP server uses the same config and token as the CLI. Make sure you've already run zenodo config set token <token>.

Available tools

Tool	Description
records_list	List your own records and drafts
records_search	Search published records
records_get	Get a single record by ID
records_versions	List all versions of a record
communities_list	List your communities
licenses_search	Search available licenses

Environment variables

Variable	Description
ZENODO_TOKEN	API token (overrides keyring/config)
ZENODO_PROFILE	Config profile to use
ZENODO_SANDBOX	Set to true to use sandbox

Dependencies

Package	Used for
spf13/cobra	CLI framework
spf13/viper	Config management
zalando/go-keyring	OS keychain for token storage
olekukonko/tablewriter	Table output formatting
mattn/go-isatty	TTY detection for output auto-switching
r3labs/diff/v3	Structural metadata diffing
fatih/color	Colored terminal output