Under the section, it says:
"The SES and SAS are analyical."
At first, I thought it was just a typo of analytical? However, the next line says, "The volume is numerical. In the case of a single sphere, it is always too small, but converges with high density." So maybe not that simple?
You can see my current attempt near the bottom of this notebook in the 'binderized' branch of my fork of this repo. I may be way off on what was intended there for the bulleted items.
For context, I came across this testing out the notebook in sessions launched where the msms_wrapper script would already be present the examples notebook would work in the session.
You can try it out by going here and pressing the 'launch binder' badge.
All it really needed was adding the binder directory with the necessary packages listed in requirements.txt. And then editing the badge to point the MyBinder service at the right place. Adding in PyVista though required to take things to the pro-level and wasn't able to control it as much as I would have liked. For example, I couldn't find the right combination to install curl. (If you launch with that branch as the source, you can see before I added PyVista, the other things worked fine by clicking here to try it out. )
For now, I rearranged the notebook sections because the PyVista-featuring section wasn't working; however, I since fixed that I also wondered whether other more Jupyter-centric surface/volume rendering tech may be easier.
Under the section, it says:
At first, I thought it was just a typo of analytical? However, the next line says, "The volume is numerical. In the case of a single sphere, it is always too small, but converges with high density." So maybe not that simple?
You can see my current attempt near the bottom of this notebook in the 'binderized' branch of my fork of this repo. I may be way off on what was intended there for the bulleted items.
For context, I came across this testing out the notebook in sessions launched where the msms_wrapper script would already be present the examples notebook would work in the session.
You can try it out by going here and pressing the '
launch binder' badge.All it really needed was adding the
binderdirectory with the necessary packages listed inrequirements.txt. And then editing the badge to point the MyBinder service at the right place. Adding in PyVista though required to take things to the pro-level and wasn't able to control it as much as I would have liked. For example, I couldn't find the right combination to installcurl. (If you launch with that branch as the source, you can see before I added PyVista, the other things worked fine by clicking here to try it out. )For now, I rearranged the notebook sections because the PyVista-featuring section wasn't working; however, I since fixed that I also wondered whether other more Jupyter-centric surface/volume rendering tech may be easier.