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royfrancis/README.md

Hi there 👋

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Repositories

R Shiny

Web applications built in R using Shiny.

shiny-flyerCreate flyers for workshops
shiny-rnaseq-powerRun power analyses for RNASeq experiments
shiny-nametaggerCreate name tags for clip-on badges
shiny-doorsignCreate door signage for office
shiny-plannerA planner calendar
shiny-certificate*/certexpressGenerate course certificates
shiny-valkompassRuns PCA and plots your views on Swedish political latent space
pophelperShinyVisualise admixture proportions

Quarto and Rmarkdown

quarto-toastuiQuarto extension to add toastui calendar component to HTML
quarto-revealjs-pointerQuarto extension to add trailing pointer to revealjs presentation
quarto-leafletQuarto extension to create leaflet maps
quarto-typst-flyerQuarto extension using Typst to create flyer
quarto-particlesQuarto extension to add particles.js
quarto-typst-nametagQuarto extension using Typst to create nametags
quarto-typst-certificateQuarto extension using Typst to create certificates
quarto-teamQuarto extension to add a team layout
quarto-accordionQuarto extension to add accordions
speckyQuarto website template for courses
quarto-revealjs-headerQuarto extension to add logos to revealjs presentation
abstraveQuarto website template for courses
foliumQuarto website template for NBIS projects
folium-webpageQuarto single page template for NBIS projects
mintyRmarkdown report and xaringan presentation template for NBIS projects
workshop-template-rmd-gaRMarkdown workshop website template with github actions
raukrtemplateRmarkdown report and presentation template used for RaukR workshop 2018-2022

R packages

renvtoolsRead, write and compare renv lock files
plummyggplot2 custom themes
easyshinyGenerate shiny app from single-cell transcriptomics data
pixtureHTML image gallery with lightbox using htmlwidgets
pophelperAnalyse and visualise admixture proportions
iscrapeInstagram scrapper

Teaching

raukr-2026RaukR 2026: Data Science With R*
raukr-2025RaukR 2025: R Beyond The Basics*
raukr-2024RaukR 2024: Advanced R for Bioinformatics*
workshop-scRNAseqSingle cell RNAseq analysis*
workshop-ngsintroIntroduction to Bioinformatics using NGS data*
workshop-rnaseqAnalyses of Bulk RNAseq data*
raukr-2023RaukR 2023: Advanced R for Bioinformatics*
RaukR-2022RaukR 2022: Advanced R for Bioinformatics*
RaukR-2021RaukR 2021: Advanced R for Bioinformatics*
course-r2 day R course for beginners
RaukR-2019RaukR 2019: Advanced R for Bioinformatics*
RaukR-2018RaukR 2018: Advanced R for Bioinformatics*
workshop-r5 day R course for beginners*

Other

SensorScopeFilm and camera sensor formats
FontcheckInteractive font preview
SeqHubKnowledgebase for RNASeq and scRNASeq
r-calendarPhoto calendar for print using R
skSkandia mortgage interest rates interactive plot
docker-zellkonverterDocker image to run zellkonverter

*Hosted on organisation account.

Pinned Loading

  1. pophelperpophelperPublic

    An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.

    R 151 39

  2. abstraveabstravePublic

    Quarto website template for courses

    SCSS 12 2

  3. speckyspeckyPublic

    Quarto website template for courses

    SCSS 7 2

  4. pixturepixturePublic

    HTML Image Gallery in R with responsive layouts and lightbox

    JavaScript 21 4

  5. foliumfoliumPublic

    A quarto website template for NBIS project reports

    SCSS 4 1

  6. NBISweden/raukrNBISweden/raukrPublic

    RaukR • Data Science with R

    SCSS