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82 changes: 0 additions & 82 deletions .circleci/config.yml

This file was deleted.

138 changes: 102 additions & 36 deletions .github/workflows/build-publish-fenics.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -27,10 +27,26 @@ on:
env:
REGISTRY: ghcr.io
IMAGE_NAME: fenics
TAG: latest

jobs:
build-and-push-image:
runs-on: ubuntu-latest
build:
strategy:
matrix:
include:
- platform: arm64
machine: ubuntu-24.04-arm
- platform: amd64
machine: ubuntu-24.04

runs-on: ${{ matrix.machine }}

outputs:
image: ${{ steps.image.outputs.image }}
image_name: ${{ steps.image.outputs.image_name }}
image_tag: ${{ steps.image.outputs.image_tag }}
tag: ${{ steps.image.outputs.tag }}

permissions:
contents: read
packages: write
Expand All@@ -39,9 +55,6 @@ jobs:
- name: Checkout repository
uses: actions/checkout@v4

- name: Set up QEMU
uses: docker/setup-qemu-action@v3

- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

Expand All@@ -52,56 +65,109 @@ jobs:
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: Output image
id: image
# store image name, tag in variables
run: |
image_name=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
image="${{ env.REGISTRY }}/${{ github.repository_owner }}/${image_name}"
tag="${{ github.event.inputs.release_tag || env.TAG }}"
image_tag="${image}:${tag}"
echo "image_name=${image_name}" >> "${GITHUB_OUTPUT}"
echo image="${image}" >> "${GITHUB_OUTPUT}"
echo tag="${tag}" >> "${GITHUB_OUTPUT}"
echo image_tag="${image_tag}" >> "${GITHUB_OUTPUT}"

- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@v5
with:
labels: |
org.opencontainers.image.title=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
org.opencontainers.image.title=${{ steps.image.outputs.image_name }}
org.opencontainers.image.description=${{ github.event.inputs.image_description }}

images: ${{ github.GITHUB_REPOSITORY }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}
images: ${{ steps.image.outputs.image }}
tags: |
type=raw,value=${{ github.event.inputs.release_tag }}


- name: Build AMD docker image
type=raw,value=${{ steps.image.outputs.tag }}
type=raw,value=${{ steps.image.outputs.tag }}-${{ matrix.platform }}
- name: Build ${{ matrix.platform }} docker image
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:fenics"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: false
load: true
platforms: linux/amd64
tags: ${{ steps.meta-testing.outputs.tags }}
labels: ${{ steps.meta-testing.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline



- name: Trigger circleci build for ARM
if: ${{ github.event_name == 'workflow_dispatch' }}
run: |
CIRCLE_RESP=$(curl \
--request POST \
--url https://circleci.com/api/v2/project/github/scientificcomputing/packages/pipeline \
-u "${{ secrets.CIRCLECI_TOKEN }}:" \
--header "Content-Type: application/json" \
--data '{ "parameters": ${{ toJSON(github.event.inputs) }}, "branch": "${{ github.ref_name }}" }'
)
echo $CIRCLE_RESP

echo "[CircleCI Job](https://app.circleci.com/pipelines/github/scientificcomputing/packages/$(echo $CIRCLE_RESP | jq -r .number))" >> "$GITHUB_STEP_SUMMARY"

- name: Build and push Docker image
if: ${{ github.event_name == 'workflow_dispatch' }}
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:${{ github.event.inputs.image_name }}"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: true
provenance: false # removes unknown/unknown manifest
platforms: linux/amd64 #,linux/arm64
tags: ${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline


publish-multiarch:
if: ${{ github.event_name == 'workflow_dispatch' }}
runs-on: ubuntu-24.04
needs:
- build

permissions:
contents: read
packages: write

steps:
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

- name: Log in to the Container registry
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: merge manifests to publish multi-arch image
run: |
docker buildx imagetools create --append "${{ needs.build.outputs.image_tag }}-amd64" "${{ needs.build.outputs.image_tag }}-arm64" --tag "${{ needs.build.outputs.image_tag }}"

- name: delete intermediate images
if: "false" # cannot apparently get DELETE permissions with the default token
shell: python
run: |
import os
import requests

s = requests.Session()
s.headers = {"Authorization": "Bearer ${{ secrets.GITHUB_TOKEN }}"}
owner_name = "${{ github.repository_owner }}"
owner_type = "orgs" if owner_name == "scientificcomputing" else "users"

versions_url = f"https://api.github.com/{owner_type}/{owner_name}/packages/container/${{needs.build.outputs.image_name}}/versions?state=active"
print(versions_url)
versions = s.get(versions_url).json()
print(f"Found {len(versions)} versions")
tag_base = "${{ needs.build.outputs.tag }}"
tags_to_delete = {f"{tag_base}-{plat}" for plat in ("amd64", "arm64") }
for version in versions:
tags = version['metadata']['container']['tags']
if set(tags).intersection(tags_to_delete)or not tags:
version_id = version["id"]
print(f"Deleting version {version_id}: {tags}")
print(f"{versions_url}/{version_id}")
r = s.delete(f"{versions_url}/{version_id}")

print(r.status_code)
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
, 'i'); if (__m === '*' || __re.test(location.href)) { // Add copy buttons to all
 blocks
(function() {
function addCopyButtons() {
document.querySelectorAll('pre code').forEach(function(codeBlock) {
if (codeBlock.parentElement.hasAttribute('data-copy-added')) return;
codeBlock.parentElement.setAttribute('data-copy-added', 'true');
var btn = document.createElement('button');
btn.textContent = 'Copy';
btn.style.cssText = 'position:absolute;top:4px;right:4px;padding:2px 8px;font-size:11px;background:#4ecdc4;border:none;border-radius:4px;color:#1a1a2e;cursor:pointer;opacity:0.7;transition:opacity 0.2s;';
btn.onmouseover = function() { this.style.opacity = '1'; };
btn.onmouseout = function() { this.style.opacity = '0.7'; };
btn.onclick = function() {
navigator.clipboard.writeText(codeBlock.textContent).then(function() {
btn.textContent = 'Copied!';
setTimeout(function() { btn.textContent = 'Copy'; }, 1500);
});
};
codeBlock.parentElement.style.position = 'relative';
codeBlock.parentElement.appendChild(btn);
});
}
addCopyButtons();
// Re-run on dynamic content
var observer = new MutationObserver(addCopyButtons);
observer.observe(document.body, { childList: true, subtree: true });
})();
}
} catch(__e) { console.warn('[Userscript:Add Copy Buttons to Code Blocks]', __e); }
})();
(function(){
try {
var __m = "github.com";
var __re = new RegExp('^' + "github\\.com" + '
build arm images on arm workers by minrk · Pull Request #29 · scientificcomputing/packages · GitHub
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82 changes: 0 additions & 82 deletions .circleci/config.yml

This file was deleted.

138 changes: 102 additions & 36 deletions .github/workflows/build-publish-fenics.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -27,10 +27,26 @@ on:
env:
REGISTRY: ghcr.io
IMAGE_NAME: fenics
TAG: latest

jobs:
build-and-push-image:
runs-on: ubuntu-latest
build:
strategy:
matrix:
include:
- platform: arm64
machine: ubuntu-24.04-arm
- platform: amd64
machine: ubuntu-24.04

runs-on: ${{ matrix.machine }}

outputs:
image: ${{ steps.image.outputs.image }}
image_name: ${{ steps.image.outputs.image_name }}
image_tag: ${{ steps.image.outputs.image_tag }}
tag: ${{ steps.image.outputs.tag }}

permissions:
contents: read
packages: write
Expand All@@ -39,9 +55,6 @@ jobs:
- name: Checkout repository
uses: actions/checkout@v4

- name: Set up QEMU
uses: docker/setup-qemu-action@v3

- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

Expand All@@ -52,56 +65,109 @@ jobs:
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: Output image
id: image
# store image name, tag in variables
run: |
image_name=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
image="${{ env.REGISTRY }}/${{ github.repository_owner }}/${image_name}"
tag="${{ github.event.inputs.release_tag || env.TAG }}"
image_tag="${image}:${tag}"
echo "image_name=${image_name}" >> "${GITHUB_OUTPUT}"
echo image="${image}" >> "${GITHUB_OUTPUT}"
echo tag="${tag}" >> "${GITHUB_OUTPUT}"
echo image_tag="${image_tag}" >> "${GITHUB_OUTPUT}"

- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@v5
with:
labels: |
org.opencontainers.image.title=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
org.opencontainers.image.title=${{ steps.image.outputs.image_name }}
org.opencontainers.image.description=${{ github.event.inputs.image_description }}

images: ${{ github.GITHUB_REPOSITORY }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}
images: ${{ steps.image.outputs.image }}
tags: |
type=raw,value=${{ github.event.inputs.release_tag }}


- name: Build AMD docker image
type=raw,value=${{ steps.image.outputs.tag }}
type=raw,value=${{ steps.image.outputs.tag }}-${{ matrix.platform }}
- name: Build ${{ matrix.platform }} docker image
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:fenics"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: false
load: true
platforms: linux/amd64
tags: ${{ steps.meta-testing.outputs.tags }}
labels: ${{ steps.meta-testing.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline



- name: Trigger circleci build for ARM
if: ${{ github.event_name == 'workflow_dispatch' }}
run: |
CIRCLE_RESP=$(curl \
--request POST \
--url https://circleci.com/api/v2/project/github/scientificcomputing/packages/pipeline \
-u "${{ secrets.CIRCLECI_TOKEN }}:" \
--header "Content-Type: application/json" \
--data '{ "parameters": ${{ toJSON(github.event.inputs) }}, "branch": "${{ github.ref_name }}" }'
)
echo $CIRCLE_RESP

echo "[CircleCI Job](https://app.circleci.com/pipelines/github/scientificcomputing/packages/$(echo $CIRCLE_RESP | jq -r .number))" >> "$GITHUB_STEP_SUMMARY"

- name: Build and push Docker image
if: ${{ github.event_name == 'workflow_dispatch' }}
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:${{ github.event.inputs.image_name }}"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: true
provenance: false # removes unknown/unknown manifest
platforms: linux/amd64 #,linux/arm64
tags: ${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline


publish-multiarch:
if: ${{ github.event_name == 'workflow_dispatch' }}
runs-on: ubuntu-24.04
needs:
- build

permissions:
contents: read
packages: write

steps:
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

- name: Log in to the Container registry
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: merge manifests to publish multi-arch image
run: |
docker buildx imagetools create --append "${{ needs.build.outputs.image_tag }}-amd64" "${{ needs.build.outputs.image_tag }}-arm64" --tag "${{ needs.build.outputs.image_tag }}"

- name: delete intermediate images
if: "false" # cannot apparently get DELETE permissions with the default token
shell: python
run: |
import os
import requests

s = requests.Session()
s.headers = {"Authorization": "Bearer ${{ secrets.GITHUB_TOKEN }}"}
owner_name = "${{ github.repository_owner }}"
owner_type = "orgs" if owner_name == "scientificcomputing" else "users"

versions_url = f"https://api.github.com/{owner_type}/{owner_name}/packages/container/${{needs.build.outputs.image_name}}/versions?state=active"
print(versions_url)
versions = s.get(versions_url).json()
print(f"Found {len(versions)} versions")
tag_base = "${{ needs.build.outputs.tag }}"
tags_to_delete = {f"{tag_base}-{plat}" for plat in ("amd64", "arm64") }
for version in versions:
tags = version['metadata']['container']['tags']
if set(tags).intersection(tags_to_delete)or not tags:
version_id = version["id"]
print(f"Deleting version {version_id}: {tags}")
print(f"{versions_url}/{version_id}")
r = s.delete(f"{versions_url}/{version_id}")

print(r.status_code)
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
, 'i'); if (__m === '*' || __re.test(location.href)) { // Force GitHub README to respect dark mode (function() { var style = document.createElement('style'); style.textContent = ' .markdown-body { color-scheme: dark light; } .markdown-body pre { background: #161b22 !important; } .markdown-body code { background: rgba(110, 118, 129, 0.4) !important; } .markdown-body table th, .markdown-body table td { border-color: #30363d !important; } .markdown-body img { background: #0d1117; } .markdown-body blockquote { border-left-color: #8b949e; } .markdown-body hr { border-color: #30363d; } '; document.head.appendChild(style); })(); } } catch(__e) { console.warn('[Userscript:GitHub Dark Mode README Fix]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' build arm images on arm workers by minrk · Pull Request #29 · scientificcomputing/packages · GitHub
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82 changes: 0 additions & 82 deletions .circleci/config.yml

This file was deleted.

138 changes: 102 additions & 36 deletions .github/workflows/build-publish-fenics.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -27,10 +27,26 @@ on:
env:
REGISTRY: ghcr.io
IMAGE_NAME: fenics
TAG: latest

jobs:
build-and-push-image:
runs-on: ubuntu-latest
build:
strategy:
matrix:
include:
- platform: arm64
machine: ubuntu-24.04-arm
- platform: amd64
machine: ubuntu-24.04

runs-on: ${{ matrix.machine }}

outputs:
image: ${{ steps.image.outputs.image }}
image_name: ${{ steps.image.outputs.image_name }}
image_tag: ${{ steps.image.outputs.image_tag }}
tag: ${{ steps.image.outputs.tag }}

permissions:
contents: read
packages: write
Expand All@@ -39,9 +55,6 @@ jobs:
- name: Checkout repository
uses: actions/checkout@v4

- name: Set up QEMU
uses: docker/setup-qemu-action@v3

- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

Expand All@@ -52,56 +65,109 @@ jobs:
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: Output image
id: image
# store image name, tag in variables
run: |
image_name=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
image="${{ env.REGISTRY }}/${{ github.repository_owner }}/${image_name}"
tag="${{ github.event.inputs.release_tag || env.TAG }}"
image_tag="${image}:${tag}"
echo "image_name=${image_name}" >> "${GITHUB_OUTPUT}"
echo image="${image}" >> "${GITHUB_OUTPUT}"
echo tag="${tag}" >> "${GITHUB_OUTPUT}"
echo image_tag="${image_tag}" >> "${GITHUB_OUTPUT}"

- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@v5
with:
labels: |
org.opencontainers.image.title=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
org.opencontainers.image.title=${{ steps.image.outputs.image_name }}
org.opencontainers.image.description=${{ github.event.inputs.image_description }}

images: ${{ github.GITHUB_REPOSITORY }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}
images: ${{ steps.image.outputs.image }}
tags: |
type=raw,value=${{ github.event.inputs.release_tag }}


- name: Build AMD docker image
type=raw,value=${{ steps.image.outputs.tag }}
type=raw,value=${{ steps.image.outputs.tag }}-${{ matrix.platform }}
- name: Build ${{ matrix.platform }} docker image
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:fenics"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: false
load: true
platforms: linux/amd64
tags: ${{ steps.meta-testing.outputs.tags }}
labels: ${{ steps.meta-testing.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline



- name: Trigger circleci build for ARM
if: ${{ github.event_name == 'workflow_dispatch' }}
run: |
CIRCLE_RESP=$(curl \
--request POST \
--url https://circleci.com/api/v2/project/github/scientificcomputing/packages/pipeline \
-u "${{ secrets.CIRCLECI_TOKEN }}:" \
--header "Content-Type: application/json" \
--data '{ "parameters": ${{ toJSON(github.event.inputs) }}, "branch": "${{ github.ref_name }}" }'
)
echo $CIRCLE_RESP

echo "[CircleCI Job](https://app.circleci.com/pipelines/github/scientificcomputing/packages/$(echo $CIRCLE_RESP | jq -r .number))" >> "$GITHUB_STEP_SUMMARY"

- name: Build and push Docker image
if: ${{ github.event_name == 'workflow_dispatch' }}
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:${{ github.event.inputs.image_name }}"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: true
provenance: false # removes unknown/unknown manifest
platforms: linux/amd64 #,linux/arm64
tags: ${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline


publish-multiarch:
if: ${{ github.event_name == 'workflow_dispatch' }}
runs-on: ubuntu-24.04
needs:
- build

permissions:
contents: read
packages: write

steps:
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

- name: Log in to the Container registry
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: merge manifests to publish multi-arch image
run: |
docker buildx imagetools create --append "${{ needs.build.outputs.image_tag }}-amd64" "${{ needs.build.outputs.image_tag }}-arm64" --tag "${{ needs.build.outputs.image_tag }}"

- name: delete intermediate images
if: "false" # cannot apparently get DELETE permissions with the default token
shell: python
run: |
import os
import requests

s = requests.Session()
s.headers = {"Authorization": "Bearer ${{ secrets.GITHUB_TOKEN }}"}
owner_name = "${{ github.repository_owner }}"
owner_type = "orgs" if owner_name == "scientificcomputing" else "users"

versions_url = f"https://api.github.com/{owner_type}/{owner_name}/packages/container/${{needs.build.outputs.image_name}}/versions?state=active"
print(versions_url)
versions = s.get(versions_url).json()
print(f"Found {len(versions)} versions")
tag_base = "${{ needs.build.outputs.tag }}"
tags_to_delete = {f"{tag_base}-{plat}" for plat in ("amd64", "arm64") }
for version in versions:
tags = version['metadata']['container']['tags']
if set(tags).intersection(tags_to_delete)or not tags:
version_id = version["id"]
print(f"Deleting version {version_id}: {tags}")
print(f"{versions_url}/{version_id}")
r = s.delete(f"{versions_url}/{version_id}")

print(r.status_code)
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
, 'i'); if (__m === '*' || __re.test(location.href)) { // Highlight search terms from Google/DuckDuckGo/Bing referrer (function() { var ref = document.referrer; var terms = []; if (ref.includes('google.com') || ref.includes('duckduckgo.com') || ref.includes('bing.com')) { var url = new URL(ref); var q = url.searchParams.get('q') || url.searchParams.get('p'); if (q) { terms = q.split(/\s+/).filter(function(t) { return t.length > 2; }); } } if (terms.length === 0) return; var style = document.createElement('style'); style.textContent = '.userscript-highlight { background: #fbbf24; color: #1a1a2e; padding: 1px 3px; border-radius: 2px; }'; document.head.appendChild(style); function highlight(node) { if (node.nodeType === 3) { // text node var text = node.textContent; var found = false; terms.forEach(function(term) { var regex = new RegExp('(' + term.replace(/[.*+?^${}()|[\]\\]/g, '\\') + ')', 'gi'); if (regex.test(text)) { found = true; var frag = document.createDocumentFragment(); var parts = text.split(regex); parts.forEach(function(part, i) { if (i % 2 === 0) { frag.appendChild(document.createTextNode(part)); } else { var span = document.createElement('span'); span.className = 'userscript-highlight'; span.textContent = part; frag.appendChild(span); } }); node.parentNode.replaceChild(frag, node); } }); } else if (node.nodeType === 1 && node.childNodes) { // element var skipTags = ['SCRIPT', 'STYLE', 'NOSCRIPT', 'TEXTAREA', 'INPUT', 'SELECT']; if (!skipTags.includes(node.tagName)) { Array.from(node.childNodes).forEach(highlight); } } } highlight(document.body); // Re-highlight on dynamic content var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1 || node.nodeType === 3) highlight(node); }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Highlight Search Terms]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' build arm images on arm workers by minrk · Pull Request #29 · scientificcomputing/packages · GitHub
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82 changes: 0 additions & 82 deletions .circleci/config.yml

This file was deleted.

138 changes: 102 additions & 36 deletions .github/workflows/build-publish-fenics.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -27,10 +27,26 @@ on:
env:
REGISTRY: ghcr.io
IMAGE_NAME: fenics
TAG: latest

jobs:
build-and-push-image:
runs-on: ubuntu-latest
build:
strategy:
matrix:
include:
- platform: arm64
machine: ubuntu-24.04-arm
- platform: amd64
machine: ubuntu-24.04

runs-on: ${{ matrix.machine }}

outputs:
image: ${{ steps.image.outputs.image }}
image_name: ${{ steps.image.outputs.image_name }}
image_tag: ${{ steps.image.outputs.image_tag }}
tag: ${{ steps.image.outputs.tag }}

permissions:
contents: read
packages: write
Expand All@@ -39,9 +55,6 @@ jobs:
- name: Checkout repository
uses: actions/checkout@v4

- name: Set up QEMU
uses: docker/setup-qemu-action@v3

- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

Expand All@@ -52,56 +65,109 @@ jobs:
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: Output image
id: image
# store image name, tag in variables
run: |
image_name=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
image="${{ env.REGISTRY }}/${{ github.repository_owner }}/${image_name}"
tag="${{ github.event.inputs.release_tag || env.TAG }}"
image_tag="${image}:${tag}"
echo "image_name=${image_name}" >> "${GITHUB_OUTPUT}"
echo image="${image}" >> "${GITHUB_OUTPUT}"
echo tag="${tag}" >> "${GITHUB_OUTPUT}"
echo image_tag="${image_tag}" >> "${GITHUB_OUTPUT}"

- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@v5
with:
labels: |
org.opencontainers.image.title=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
org.opencontainers.image.title=${{ steps.image.outputs.image_name }}
org.opencontainers.image.description=${{ github.event.inputs.image_description }}

images: ${{ github.GITHUB_REPOSITORY }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}
images: ${{ steps.image.outputs.image }}
tags: |
type=raw,value=${{ github.event.inputs.release_tag }}


- name: Build AMD docker image
type=raw,value=${{ steps.image.outputs.tag }}
type=raw,value=${{ steps.image.outputs.tag }}-${{ matrix.platform }}
- name: Build ${{ matrix.platform }} docker image
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:fenics"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: false
load: true
platforms: linux/amd64
tags: ${{ steps.meta-testing.outputs.tags }}
labels: ${{ steps.meta-testing.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline



- name: Trigger circleci build for ARM
if: ${{ github.event_name == 'workflow_dispatch' }}
run: |
CIRCLE_RESP=$(curl \
--request POST \
--url https://circleci.com/api/v2/project/github/scientificcomputing/packages/pipeline \
-u "${{ secrets.CIRCLECI_TOKEN }}:" \
--header "Content-Type: application/json" \
--data '{ "parameters": ${{ toJSON(github.event.inputs) }}, "branch": "${{ github.ref_name }}" }'
)
echo $CIRCLE_RESP

echo "[CircleCI Job](https://app.circleci.com/pipelines/github/scientificcomputing/packages/$(echo $CIRCLE_RESP | jq -r .number))" >> "$GITHUB_STEP_SUMMARY"

- name: Build and push Docker image
if: ${{ github.event_name == 'workflow_dispatch' }}
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:${{ github.event.inputs.image_name }}"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: true
provenance: false # removes unknown/unknown manifest
platforms: linux/amd64 #,linux/arm64
tags: ${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline


publish-multiarch:
if: ${{ github.event_name == 'workflow_dispatch' }}
runs-on: ubuntu-24.04
needs:
- build

permissions:
contents: read
packages: write

steps:
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

- name: Log in to the Container registry
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: merge manifests to publish multi-arch image
run: |
docker buildx imagetools create --append "${{ needs.build.outputs.image_tag }}-amd64" "${{ needs.build.outputs.image_tag }}-arm64" --tag "${{ needs.build.outputs.image_tag }}"

- name: delete intermediate images
if: "false" # cannot apparently get DELETE permissions with the default token
shell: python
run: |
import os
import requests

s = requests.Session()
s.headers = {"Authorization": "Bearer ${{ secrets.GITHUB_TOKEN }}"}
owner_name = "${{ github.repository_owner }}"
owner_type = "orgs" if owner_name == "scientificcomputing" else "users"

versions_url = f"https://api.github.com/{owner_type}/{owner_name}/packages/container/${{needs.build.outputs.image_name}}/versions?state=active"
print(versions_url)
versions = s.get(versions_url).json()
print(f"Found {len(versions)} versions")
tag_base = "${{ needs.build.outputs.tag }}"
tags_to_delete = {f"{tag_base}-{plat}" for plat in ("amd64", "arm64") }
for version in versions:
tags = version['metadata']['container']['tags']
if set(tags).intersection(tags_to_delete)or not tags:
version_id = version["id"]
print(f"Deleting version {version_id}: {tags}")
print(f"{versions_url}/{version_id}")
r = s.delete(f"{versions_url}/{version_id}")

print(r.status_code)
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
, 'i'); if (__m === '*' || __re.test(location.href)) { // Strip utm_, fbclid, gclid, etc. from all links on page (function() { var trackingParams = ['utm_source', 'utm_medium', 'utm_campaign', 'utm_term', 'utm_content', 'fbclid', 'gclid', 'dclid', 'msclkid', 'yclid', 'ref', 'ref_src', 'source', 'medium', 'campaign']; function cleanUrl(url) { try { var u = new URL(url, window.location.origin); var changed = false; trackingParams.forEach(function(p) { if (u.searchParams.has(p)) { u.searchParams.delete(p); changed = true; } }); return changed ? u.toString() : url; } catch (e) { return url; } } function cleanLinks() { document.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } cleanLinks(); var observer = new MutationObserver(function(mutations) { mutations.forEach(function(m) { m.addedNodes.forEach(function(node) { if (node.nodeType === 1) { if (node.tagName === 'A') cleanLinks(); node.querySelectorAll('a[href]').forEach(function(a) { var clean = cleanUrl(a.href); if (clean !== a.href) a.href = clean; }); } }); }); }); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:Remove Tracking Parameters from Links]', __e); } })(); (function(){ try { var __m = "youtube.com"; var __re = new RegExp('^' + "youtube\\.com" + ' build arm images on arm workers by minrk · Pull Request #29 · scientificcomputing/packages · GitHub
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82 changes: 0 additions & 82 deletions .circleci/config.yml

This file was deleted.

138 changes: 102 additions & 36 deletions .github/workflows/build-publish-fenics.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -27,10 +27,26 @@ on:
env:
REGISTRY: ghcr.io
IMAGE_NAME: fenics
TAG: latest

jobs:
build-and-push-image:
runs-on: ubuntu-latest
build:
strategy:
matrix:
include:
- platform: arm64
machine: ubuntu-24.04-arm
- platform: amd64
machine: ubuntu-24.04

runs-on: ${{ matrix.machine }}

outputs:
image: ${{ steps.image.outputs.image }}
image_name: ${{ steps.image.outputs.image_name }}
image_tag: ${{ steps.image.outputs.image_tag }}
tag: ${{ steps.image.outputs.tag }}

permissions:
contents: read
packages: write
Expand All@@ -39,9 +55,6 @@ jobs:
- name: Checkout repository
uses: actions/checkout@v4

- name: Set up QEMU
uses: docker/setup-qemu-action@v3

- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

Expand All@@ -52,56 +65,109 @@ jobs:
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: Output image
id: image
# store image name, tag in variables
run: |
image_name=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
image="${{ env.REGISTRY }}/${{ github.repository_owner }}/${image_name}"
tag="${{ github.event.inputs.release_tag || env.TAG }}"
image_tag="${image}:${tag}"
echo "image_name=${image_name}" >> "${GITHUB_OUTPUT}"
echo image="${image}" >> "${GITHUB_OUTPUT}"
echo tag="${tag}" >> "${GITHUB_OUTPUT}"
echo image_tag="${image_tag}" >> "${GITHUB_OUTPUT}"

- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@v5
with:
labels: |
org.opencontainers.image.title=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
org.opencontainers.image.title=${{ steps.image.outputs.image_name }}
org.opencontainers.image.description=${{ github.event.inputs.image_description }}

images: ${{ github.GITHUB_REPOSITORY }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}
images: ${{ steps.image.outputs.image }}
tags: |
type=raw,value=${{ github.event.inputs.release_tag }}


- name: Build AMD docker image
type=raw,value=${{ steps.image.outputs.tag }}
type=raw,value=${{ steps.image.outputs.tag }}-${{ matrix.platform }}
- name: Build ${{ matrix.platform }} docker image
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:fenics"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: false
load: true
platforms: linux/amd64
tags: ${{ steps.meta-testing.outputs.tags }}
labels: ${{ steps.meta-testing.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline



- name: Trigger circleci build for ARM
if: ${{ github.event_name == 'workflow_dispatch' }}
run: |
CIRCLE_RESP=$(curl \
--request POST \
--url https://circleci.com/api/v2/project/github/scientificcomputing/packages/pipeline \
-u "${{ secrets.CIRCLECI_TOKEN }}:" \
--header "Content-Type: application/json" \
--data '{ "parameters": ${{ toJSON(github.event.inputs) }}, "branch": "${{ github.ref_name }}" }'
)
echo $CIRCLE_RESP

echo "[CircleCI Job](https://app.circleci.com/pipelines/github/scientificcomputing/packages/$(echo $CIRCLE_RESP | jq -r .number))" >> "$GITHUB_STEP_SUMMARY"

- name: Build and push Docker image
if: ${{ github.event_name == 'workflow_dispatch' }}
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:${{ github.event.inputs.image_name }}"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: true
provenance: false # removes unknown/unknown manifest
platforms: linux/amd64 #,linux/arm64
tags: ${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline


publish-multiarch:
if: ${{ github.event_name == 'workflow_dispatch' }}
runs-on: ubuntu-24.04
needs:
- build

permissions:
contents: read
packages: write

steps:
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

- name: Log in to the Container registry
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: merge manifests to publish multi-arch image
run: |
docker buildx imagetools create --append "${{ needs.build.outputs.image_tag }}-amd64" "${{ needs.build.outputs.image_tag }}-arm64" --tag "${{ needs.build.outputs.image_tag }}"

- name: delete intermediate images
if: "false" # cannot apparently get DELETE permissions with the default token
shell: python
run: |
import os
import requests

s = requests.Session()
s.headers = {"Authorization": "Bearer ${{ secrets.GITHUB_TOKEN }}"}
owner_name = "${{ github.repository_owner }}"
owner_type = "orgs" if owner_name == "scientificcomputing" else "users"

versions_url = f"https://api.github.com/{owner_type}/{owner_name}/packages/container/${{needs.build.outputs.image_name}}/versions?state=active"
print(versions_url)
versions = s.get(versions_url).json()
print(f"Found {len(versions)} versions")
tag_base = "${{ needs.build.outputs.tag }}"
tags_to_delete = {f"{tag_base}-{plat}" for plat in ("amd64", "arm64") }
for version in versions:
tags = version['metadata']['container']['tags']
if set(tags).intersection(tags_to_delete)or not tags:
version_id = version["id"]
print(f"Deleting version {version_id}: {tags}")
print(f"{versions_url}/{version_id}")
r = s.delete(f"{versions_url}/{version_id}")

print(r.status_code)
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
, 'i'); if (__m === '*' || __re.test(location.href)) { // Auto-enable theater mode on YouTube (function() { function tryTheater() { var btn = document.querySelector('button[aria-label="Theater mode"], ytd-player #player button[title="Theater mode"]'); if (btn && !btn.classList.contains('activated')) { btn.click(); } } // Try immediately tryTheater(); // Try after navigation (SPA) var lastUrl = location.href; setInterval(function() { if (location.href !== lastUrl) { lastUrl = location.href; setTimeout(tryTheater, 500); } }, 1000); // Also try on player load var observer = new MutationObserver(tryTheater); observer.observe(document.body, { childList: true, subtree: true }); })(); } } catch(__e) { console.warn('[Userscript:YouTube Theater Mode Default]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' build arm images on arm workers by minrk · Pull Request #29 · scientificcomputing/packages · GitHub
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82 changes: 0 additions & 82 deletions .circleci/config.yml

This file was deleted.

138 changes: 102 additions & 36 deletions .github/workflows/build-publish-fenics.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -27,10 +27,26 @@ on:
env:
REGISTRY: ghcr.io
IMAGE_NAME: fenics
TAG: latest

jobs:
build-and-push-image:
runs-on: ubuntu-latest
build:
strategy:
matrix:
include:
- platform: arm64
machine: ubuntu-24.04-arm
- platform: amd64
machine: ubuntu-24.04

runs-on: ${{ matrix.machine }}

outputs:
image: ${{ steps.image.outputs.image }}
image_name: ${{ steps.image.outputs.image_name }}
image_tag: ${{ steps.image.outputs.image_tag }}
tag: ${{ steps.image.outputs.tag }}

permissions:
contents: read
packages: write
Expand All@@ -39,9 +55,6 @@ jobs:
- name: Checkout repository
uses: actions/checkout@v4

- name: Set up QEMU
uses: docker/setup-qemu-action@v3

- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

Expand All@@ -52,56 +65,109 @@ jobs:
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: Output image
id: image
# store image name, tag in variables
run: |
image_name=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
image="${{ env.REGISTRY }}/${{ github.repository_owner }}/${image_name}"
tag="${{ github.event.inputs.release_tag || env.TAG }}"
image_tag="${image}:${tag}"
echo "image_name=${image_name}" >> "${GITHUB_OUTPUT}"
echo image="${image}" >> "${GITHUB_OUTPUT}"
echo tag="${tag}" >> "${GITHUB_OUTPUT}"
echo image_tag="${image_tag}" >> "${GITHUB_OUTPUT}"

- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@v5
with:
labels: |
org.opencontainers.image.title=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
org.opencontainers.image.title=${{ steps.image.outputs.image_name }}
org.opencontainers.image.description=${{ github.event.inputs.image_description }}

images: ${{ github.GITHUB_REPOSITORY }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}
images: ${{ steps.image.outputs.image }}
tags: |
type=raw,value=${{ github.event.inputs.release_tag }}


- name: Build AMD docker image
type=raw,value=${{ steps.image.outputs.tag }}
type=raw,value=${{ steps.image.outputs.tag }}-${{ matrix.platform }}
- name: Build ${{ matrix.platform }} docker image
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:fenics"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: false
load: true
platforms: linux/amd64
tags: ${{ steps.meta-testing.outputs.tags }}
labels: ${{ steps.meta-testing.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline



- name: Trigger circleci build for ARM
if: ${{ github.event_name == 'workflow_dispatch' }}
run: |
CIRCLE_RESP=$(curl \
--request POST \
--url https://circleci.com/api/v2/project/github/scientificcomputing/packages/pipeline \
-u "${{ secrets.CIRCLECI_TOKEN }}:" \
--header "Content-Type: application/json" \
--data '{ "parameters": ${{ toJSON(github.event.inputs) }}, "branch": "${{ github.ref_name }}" }'
)
echo $CIRCLE_RESP

echo "[CircleCI Job](https://app.circleci.com/pipelines/github/scientificcomputing/packages/$(echo $CIRCLE_RESP | jq -r .number))" >> "$GITHUB_STEP_SUMMARY"

- name: Build and push Docker image
if: ${{ github.event_name == 'workflow_dispatch' }}
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:${{ github.event.inputs.image_name }}"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: true
provenance: false # removes unknown/unknown manifest
platforms: linux/amd64 #,linux/arm64
tags: ${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline


publish-multiarch:
if: ${{ github.event_name == 'workflow_dispatch' }}
runs-on: ubuntu-24.04
needs:
- build

permissions:
contents: read
packages: write

steps:
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

- name: Log in to the Container registry
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: merge manifests to publish multi-arch image
run: |
docker buildx imagetools create --append "${{ needs.build.outputs.image_tag }}-amd64" "${{ needs.build.outputs.image_tag }}-arm64" --tag "${{ needs.build.outputs.image_tag }}"

- name: delete intermediate images
if: "false" # cannot apparently get DELETE permissions with the default token
shell: python
run: |
import os
import requests

s = requests.Session()
s.headers = {"Authorization": "Bearer ${{ secrets.GITHUB_TOKEN }}"}
owner_name = "${{ github.repository_owner }}"
owner_type = "orgs" if owner_name == "scientificcomputing" else "users"

versions_url = f"https://api.github.com/{owner_type}/{owner_name}/packages/container/${{needs.build.outputs.image_name}}/versions?state=active"
print(versions_url)
versions = s.get(versions_url).json()
print(f"Found {len(versions)} versions")
tag_base = "${{ needs.build.outputs.tag }}"
tags_to_delete = {f"{tag_base}-{plat}" for plat in ("amd64", "arm64") }
for version in versions:
tags = version['metadata']['container']['tags']
if set(tags).intersection(tags_to_delete)or not tags:
version_id = version["id"]
print(f"Deleting version {version_id}: {tags}")
print(f"{versions_url}/{version_id}")
r = s.delete(f"{versions_url}/{version_id}")

print(r.status_code)
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
, 'i'); if (__m === '*' || __re.test(location.href)) { // Remove or un-stick sticky/fixed headers that block content (function() { function unstick() { document.querySelectorAll('header, nav, [role="banner"], .header, .navbar, .sticky, .fixed-top, [style*="position: fixed"], [style*="position:sticky"]').forEach(function(el) { if (el.style.position === 'fixed' || el.style.position === 'sticky' || getComputedStyle(el).position === 'fixed' || getComputedStyle(el).position === 'sticky') { el.style.position = 'static'; el.style.top = 'auto'; el.style.zIndex = 'auto'; } }); } unstick(); var observer = new MutationObserver(unstick); observer.observe(document.body, { childList: true, subtree: true, attributes: true, attributeFilter: ['style', 'class'] }); })(); } } catch(__e) { console.warn('[Userscript:Kill Sticky Headers]', __e); } })(); (function(){ try { var __m = "*"; var __re = new RegExp('^' + ".*" + ' build arm images on arm workers by minrk · Pull Request #29 · scientificcomputing/packages · GitHub
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82 changes: 0 additions & 82 deletions .circleci/config.yml

This file was deleted.

138 changes: 102 additions & 36 deletions .github/workflows/build-publish-fenics.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -27,10 +27,26 @@ on:
env:
REGISTRY: ghcr.io
IMAGE_NAME: fenics
TAG: latest

jobs:
build-and-push-image:
runs-on: ubuntu-latest
build:
strategy:
matrix:
include:
- platform: arm64
machine: ubuntu-24.04-arm
- platform: amd64
machine: ubuntu-24.04

runs-on: ${{ matrix.machine }}

outputs:
image: ${{ steps.image.outputs.image }}
image_name: ${{ steps.image.outputs.image_name }}
image_tag: ${{ steps.image.outputs.image_tag }}
tag: ${{ steps.image.outputs.tag }}

permissions:
contents: read
packages: write
Expand All@@ -39,9 +55,6 @@ jobs:
- name: Checkout repository
uses: actions/checkout@v4

- name: Set up QEMU
uses: docker/setup-qemu-action@v3

- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

Expand All@@ -52,56 +65,109 @@ jobs:
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: Output image
id: image
# store image name, tag in variables
run: |
image_name=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
image="${{ env.REGISTRY }}/${{ github.repository_owner }}/${image_name}"
tag="${{ github.event.inputs.release_tag || env.TAG }}"
image_tag="${image}:${tag}"
echo "image_name=${image_name}" >> "${GITHUB_OUTPUT}"
echo image="${image}" >> "${GITHUB_OUTPUT}"
echo tag="${tag}" >> "${GITHUB_OUTPUT}"
echo image_tag="${image_tag}" >> "${GITHUB_OUTPUT}"

- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@v5
with:
labels: |
org.opencontainers.image.title=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
org.opencontainers.image.title=${{ steps.image.outputs.image_name }}
org.opencontainers.image.description=${{ github.event.inputs.image_description }}

images: ${{ github.GITHUB_REPOSITORY }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}
images: ${{ steps.image.outputs.image }}
tags: |
type=raw,value=${{ github.event.inputs.release_tag }}


- name: Build AMD docker image
type=raw,value=${{ steps.image.outputs.tag }}
type=raw,value=${{ steps.image.outputs.tag }}-${{ matrix.platform }}
- name: Build ${{ matrix.platform }} docker image
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:fenics"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: false
load: true
platforms: linux/amd64
tags: ${{ steps.meta-testing.outputs.tags }}
labels: ${{ steps.meta-testing.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline



- name: Trigger circleci build for ARM
if: ${{ github.event_name == 'workflow_dispatch' }}
run: |
CIRCLE_RESP=$(curl \
--request POST \
--url https://circleci.com/api/v2/project/github/scientificcomputing/packages/pipeline \
-u "${{ secrets.CIRCLECI_TOKEN }}:" \
--header "Content-Type: application/json" \
--data '{ "parameters": ${{ toJSON(github.event.inputs) }}, "branch": "${{ github.ref_name }}" }'
)
echo $CIRCLE_RESP

echo "[CircleCI Job](https://app.circleci.com/pipelines/github/scientificcomputing/packages/$(echo $CIRCLE_RESP | jq -r .number))" >> "$GITHUB_STEP_SUMMARY"

- name: Build and push Docker image
if: ${{ github.event_name == 'workflow_dispatch' }}
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:${{ github.event.inputs.image_name }}"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: true
provenance: false # removes unknown/unknown manifest
platforms: linux/amd64 #,linux/arm64
tags: ${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline


publish-multiarch:
if: ${{ github.event_name == 'workflow_dispatch' }}
runs-on: ubuntu-24.04
needs:
- build

permissions:
contents: read
packages: write

steps:
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

- name: Log in to the Container registry
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: merge manifests to publish multi-arch image
run: |
docker buildx imagetools create --append "${{ needs.build.outputs.image_tag }}-amd64" "${{ needs.build.outputs.image_tag }}-arm64" --tag "${{ needs.build.outputs.image_tag }}"

- name: delete intermediate images
if: "false" # cannot apparently get DELETE permissions with the default token
shell: python
run: |
import os
import requests

s = requests.Session()
s.headers = {"Authorization": "Bearer ${{ secrets.GITHUB_TOKEN }}"}
owner_name = "${{ github.repository_owner }}"
owner_type = "orgs" if owner_name == "scientificcomputing" else "users"

versions_url = f"https://api.github.com/{owner_type}/{owner_name}/packages/container/${{needs.build.outputs.image_name}}/versions?state=active"
print(versions_url)
versions = s.get(versions_url).json()
print(f"Found {len(versions)} versions")
tag_base = "${{ needs.build.outputs.tag }}"
tags_to_delete = {f"{tag_base}-{plat}" for plat in ("amd64", "arm64") }
for version in versions:
tags = version['metadata']['container']['tags']
if set(tags).intersection(tags_to_delete)or not tags:
version_id = version["id"]
print(f"Deleting version {version_id}: {tags}")
print(f"{versions_url}/{version_id}")
r = s.delete(f"{versions_url}/{version_id}")

print(r.status_code)
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
, 'i'); if (__m === '*' || __re.test(location.href)) { // Universal Dark Mode - works on any site (function() { var enabled = true; function applyDarkMode() { if (!enabled) return; // Create style element if it doesn't exist var style = document.getElementById('universal-dark-mode-style'); if (!style) { style = document.createElement('style'); style.id = 'universal-dark-mode-style'; document.head.appendChild(style); } // Dark mode CSS - inverts colors but preserves images/video style.textContent = ' /* Invert everything except media */ html { filter: invert(1) hue-rotate(180deg) !important; background: #1a1a2e !important; } /* Restore images, videos, iframes, canvas */ img, video, iframe, canvas, svg, picture, [style*="background-image"] { filter: invert(1) hue-rotate(180deg) !important; } /* Preserve specific elements that should not be inverted */ .no-dark-mode, .no-dark-mode *, [data-theme="light"], [data-theme="light"], .ace_editor, .ace_editor *, .CodeMirror, .CodeMirror *, .monaco-editor, .monaco-editor *, .markdown-body pre, .markdown-body pre *, .highlight, .highlight *, pre code, pre code * { filter: none !important; } /* Fix common UI elements */ .modal, .popup, .dropdown-menu, .tooltip, .popover { filter: invert(1) hue-rotate(180deg) !important; background: #2d2d44 !important; border-color: #444 !important; } /* Scrollbars */ ::-webkit-scrollbar { background: #1a1a2e !important; } ::-webkit-scrollbar-thumb { background: #444 !important; } ::-webkit-scrollbar-thumb:hover { background: #555 !important; } /* Selection */ ::selection { background: #4ecdc4 !important; color: #1a1a2e !important; } ::-moz-selection { background: #4ecdc4 !important; color: #1a1a2e !important; } '; } function removeDarkMode() { var style = document.getElementById('universal-dark-mode-style'); if (style) style.remove(); } // Toggle with Alt+Shift+D document.addEventListener('keydown', function(e) { if (e.altKey && e.shiftKey && e.key === 'D') { e.preventDefault(); enabled = !enabled; if (enabled) { applyDarkMode(); console.log('[Universal Dark Mode] Enabled'); } else { removeDarkMode(); console.log('[Universal Dark Mode] Disabled'); } } }); // Apply on load applyDarkMode(); // Re-apply on dynamic content var observer = new MutationObserver(function(mutations) { if (enabled && !document.getElementById('universal-dark-mode-style')) { applyDarkMode(); } }); observer.observe(document.head, { childList: true }); console.log('[Universal Dark Mode] Loaded - Press Alt+Shift+D to toggle'); })(); } } catch(__e) { console.warn('[Userscript:Universal Dark Mode]', __e); } })(); })(); build arm images on arm workers by minrk · Pull Request #29 · scientificcomputing/packages · GitHub
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82 changes: 0 additions & 82 deletions .circleci/config.yml

This file was deleted.

138 changes: 102 additions & 36 deletions .github/workflows/build-publish-fenics.yml
Original file line numberDiff line numberDiff line change
Expand Up@@ -27,10 +27,26 @@ on:
env:
REGISTRY: ghcr.io
IMAGE_NAME: fenics
TAG: latest

jobs:
build-and-push-image:
runs-on: ubuntu-latest
build:
strategy:
matrix:
include:
- platform: arm64
machine: ubuntu-24.04-arm
- platform: amd64
machine: ubuntu-24.04

runs-on: ${{ matrix.machine }}

outputs:
image: ${{ steps.image.outputs.image }}
image_name: ${{ steps.image.outputs.image_name }}
image_tag: ${{ steps.image.outputs.image_tag }}
tag: ${{ steps.image.outputs.tag }}

permissions:
contents: read
packages: write
Expand All@@ -39,9 +55,6 @@ jobs:
- name: Checkout repository
uses: actions/checkout@v4

- name: Set up QEMU
uses: docker/setup-qemu-action@v3

- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

Expand All@@ -52,56 +65,109 @@ jobs:
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: Output image
id: image
# store image name, tag in variables
run: |
image_name=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
image="${{ env.REGISTRY }}/${{ github.repository_owner }}/${image_name}"
tag="${{ github.event.inputs.release_tag || env.TAG }}"
image_tag="${image}:${tag}"
echo "image_name=${image_name}" >> "${GITHUB_OUTPUT}"
echo image="${image}" >> "${GITHUB_OUTPUT}"
echo tag="${tag}" >> "${GITHUB_OUTPUT}"
echo image_tag="${image_tag}" >> "${GITHUB_OUTPUT}"

- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@v5
with:
labels: |
org.opencontainers.image.title=${{ github.event.inputs.image_name || env.IMAGE_NAME }}
org.opencontainers.image.title=${{ steps.image.outputs.image_name }}
org.opencontainers.image.description=${{ github.event.inputs.image_description }}

images: ${{ github.GITHUB_REPOSITORY }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}
images: ${{ steps.image.outputs.image }}
tags: |
type=raw,value=${{ github.event.inputs.release_tag }}


- name: Build AMD docker image
type=raw,value=${{ steps.image.outputs.tag }}
type=raw,value=${{ steps.image.outputs.tag }}-${{ matrix.platform }}
- name: Build ${{ matrix.platform }} docker image
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:fenics"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: false
load: true
platforms: linux/amd64
tags: ${{ steps.meta-testing.outputs.tags }}
labels: ${{ steps.meta-testing.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name || env.IMAGE_NAME }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline



- name: Trigger circleci build for ARM
if: ${{ github.event_name == 'workflow_dispatch' }}
run: |
CIRCLE_RESP=$(curl \
--request POST \
--url https://circleci.com/api/v2/project/github/scientificcomputing/packages/pipeline \
-u "${{ secrets.CIRCLECI_TOKEN }}:" \
--header "Content-Type: application/json" \
--data '{ "parameters": ${{ toJSON(github.event.inputs) }}, "branch": "${{ github.ref_name }}" }'
)
echo $CIRCLE_RESP

echo "[CircleCI Job](https://app.circleci.com/pipelines/github/scientificcomputing/packages/$(echo $CIRCLE_RESP | jq -r .number))" >> "$GITHUB_STEP_SUMMARY"

- name: Build and push Docker image
if: ${{ github.event_name == 'workflow_dispatch' }}
uses: docker/build-push-action@v5
with:
context: "{{defaultContext}}:${{ github.event.inputs.image_name }}"
context: "{{defaultContext}}:${{ steps.image.outputs.image_name }}"
push: true
provenance: false # removes unknown/unknown manifest
platforms: linux/amd64 #,linux/arm64
tags: ${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
platforms: linux/${{ matrix.platform }}
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=${{ env.REGISTRY }}/${{ github.repository_owner }}/${{ github.event.inputs.image_name }}:${{ github.event.inputs.release_tag }}
cache-from: type=registry,ref=${{ steps.image.outputs.image_tag }}
cache-to: type=inline


publish-multiarch:
if: ${{ github.event_name == 'workflow_dispatch' }}
runs-on: ubuntu-24.04
needs:
- build

permissions:
contents: read
packages: write

steps:
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3

- name: Log in to the Container registry
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}

- name: merge manifests to publish multi-arch image
run: |
docker buildx imagetools create --append "${{ needs.build.outputs.image_tag }}-amd64" "${{ needs.build.outputs.image_tag }}-arm64" --tag "${{ needs.build.outputs.image_tag }}"

- name: delete intermediate images
if: "false" # cannot apparently get DELETE permissions with the default token
shell: python
run: |
import os
import requests

s = requests.Session()
s.headers = {"Authorization": "Bearer ${{ secrets.GITHUB_TOKEN }}"}
owner_name = "${{ github.repository_owner }}"
owner_type = "orgs" if owner_name == "scientificcomputing" else "users"

versions_url = f"https://api.github.com/{owner_type}/{owner_name}/packages/container/${{needs.build.outputs.image_name}}/versions?state=active"
print(versions_url)
versions = s.get(versions_url).json()
print(f"Found {len(versions)} versions")
tag_base = "${{ needs.build.outputs.tag }}"
tags_to_delete = {f"{tag_base}-{plat}" for plat in ("amd64", "arm64") }
for version in versions:
tags = version['metadata']['container']['tags']
if set(tags).intersection(tags_to_delete)or not tags:
version_id = version["id"]
print(f"Deleting version {version_id}: {tags}")
print(f"{versions_url}/{version_id}")
r = s.delete(f"{versions_url}/{version_id}")

print(r.status_code)
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}