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sidxz/README.md
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About Me

Focusing on bringing AI deeper into drug discovery workflows: building agentic knowledge-discovery systems that integrate structured data, scientific literature, and experimental outputs; advancing multimodal transformer models for molecular property prediction; and delivering transparent interfaces and reproducible data/cheminformatics pipelines that make complex AI decisions interpretable.

📍 Austin, TX · M.S. CS, Texas A&M


Selected Publications

YearPaperJournal
2026CAGE Fusion: Deep Learning for Nuisance Compound Detection Using a Gated Co-Attention Graph Embedding ModelJournal of Cheminformatics, Springer Nature
2025Integrating Chemical, Genetic, and Feasibility Assessments for Anti-Tubercular Target ValidationEMBO Molecular Medicine, Springer Nature
2023DAIKON: A Data Acquisition, Integration, and Knowledge Capture Web App for Target-Based Drug DiscoveryACS Pharmacology & Translational Science, American Chemical Society

Tech Stack

LanguagesPythonC#JavaScriptSQL
AI / MLPyTorchTensorFlowHuggingFaceLangChainLangGraphDeepChemRDKitvLLM
Backend.NETFastAPIKafkaTemporalKurrentDBNeo4jMongoDBPostgreSQL
FrontendReactNext.jsMobXPrimeReact
DevOps & CloudDockerTerraformAWSAzureLinuxChefGitLab CIGitHub Actions
PhilosophyClean ArchitectureCQRSEvent SourcingDomain-Driven DesignMicroservices

GitHub Stats

GitHub Streak

Contributions

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  1. SentinelSentinelPublic

    An authentication proxy and authorization microservice. Sentinel handles OAuth2/OIDC authentication from external IdPs, multi-tenant workspace management, and fine-grained Zanzibar-style permissions.

    Python 2 3

  2. DaikonDaikonPublic

    DAIKON is an open-source framework designed to streamline target-based drug discovery processes.

    C# 3 3

  3. docu-storedocu-storePublic

    Chemistry-aware document intelligence for drug discovery.

    Python 2 1

  4. dev-sec/chef-ssh-hardeningdev-sec/chef-ssh-hardeningPublic

    This chef cookbook provides secure ssh-client and ssh-server configurations.

    Ruby 168 66

  5. inspec-handlerinspec-handlerPublic

    A cookbook to perform inspec tests with client run

    Ruby 9

  6. Daikon2-FEDaikon2-FEPublic

    Web Frontend for Daikon Gen 2

    JavaScript 2 1