Sinan U. Umu sinanugur

Hello there 👋

I am a senior bioinformatics research scientist at Department of Pathology, Institute of Clinical Medicine, University of Oslo, Norway and working in the Jahnsen lab. My job profile at Klinmed UiO

⚡ I have been developing open-source bioinformatics tools downloaded by thousands including MirMachine and cellsnake.
🔭 My research interests include biostatistics, bioinformatics, molecular epidemiology, spatial transcriptomics, single-cell and bulk RNA sequencing, early detection of cancer using ML and AI, RNA biology of cancer and RNA-RNA interactions.
🔭 I also have bioinformatics pipelines written in Snakemake (also in Python and R) like a small RNA sequencing pipeline, sncRNA-workflow, or a WGS pipeline for HPV variant detection (TaME-seq)
🌱 I completed my doctoral studies in the fields of Biotechnology and Bioinformatics at the University of Canterbury in New Zealand. My research concentrated on the non-coding RNAs in prokaryotic organisms. The primary emphasis of my dissertation was on the interactions between non-coding RNAs and messenger RNAs within the genomes of bacteria and archaea.

Hello there 👋

I am a senior bioinformatics research scientist at Department of Pathology, Institute of Clinical Medicine, University of Oslo, Norway and working in the Jahnsen lab. My job profile at Klinmed UiO

⚡ I have been developing open-source bioinformatics tools downloaded by thousands including MirMachine and cellsnake.
🔭 My research interests include biostatistics, bioinformatics, molecular epidemiology, spatial transcriptomics, single-cell and bulk RNA sequencing, early detection of cancer using ML and AI, RNA biology of cancer and RNA-RNA interactions.
🔭 I also have bioinformatics pipelines written in Snakemake (also in Python and R) like a small RNA sequencing pipeline, sncRNA-workflow, or a WGS pipeline for HPV variant detection (TaME-seq)
🌱 I completed my doctoral studies in the fields of Biotechnology and Bioinformatics at the University of Canterbury in New Zealand. My research concentrated on the non-coding RNAs in prokaryotic organisms. The primary emphasis of my dissertation was on the interactions between non-coding RNAs and messenger RNAs within the genomes of bacteria and archaea.

Hello there 👋

I am a senior bioinformatics research scientist at Department of Pathology, Institute of Clinical Medicine, University of Oslo, Norway and working in the Jahnsen lab. My job profile at Klinmed UiO

⚡ I have been developing open-source bioinformatics tools downloaded by thousands including MirMachine and cellsnake.
🔭 My research interests include biostatistics, bioinformatics, molecular epidemiology, spatial transcriptomics, single-cell and bulk RNA sequencing, early detection of cancer using ML and AI, RNA biology of cancer and RNA-RNA interactions.
🔭 I also have bioinformatics pipelines written in Snakemake (also in Python and R) like a small RNA sequencing pipeline, sncRNA-workflow, or a WGS pipeline for HPV variant detection (TaME-seq)
🌱 I completed my doctoral studies in the fields of Biotechnology and Bioinformatics at the University of Canterbury in New Zealand. My research concentrated on the non-coding RNAs in prokaryotic organisms. The primary emphasis of my dissertation was on the interactions between non-coding RNAs and messenger RNAs within the genomes of bacteria and archaea.

Hello there 👋

I am a senior bioinformatics research scientist at Department of Pathology, Institute of Clinical Medicine, University of Oslo, Norway and working in the Jahnsen lab. My job profile at Klinmed UiO

⚡ I have been developing open-source bioinformatics tools downloaded by thousands including MirMachine and cellsnake.
🔭 My research interests include biostatistics, bioinformatics, molecular epidemiology, spatial transcriptomics, single-cell and bulk RNA sequencing, early detection of cancer using ML and AI, RNA biology of cancer and RNA-RNA interactions.
🔭 I also have bioinformatics pipelines written in Snakemake (also in Python and R) like a small RNA sequencing pipeline, sncRNA-workflow, or a WGS pipeline for HPV variant detection (TaME-seq)
🌱 I completed my doctoral studies in the fields of Biotechnology and Bioinformatics at the University of Canterbury in New Zealand. My research concentrated on the non-coding RNAs in prokaryotic organisms. The primary emphasis of my dissertation was on the interactions between non-coding RNAs and messenger RNAs within the genomes of bacteria and archaea.

Hello there 👋

I am a senior bioinformatics research scientist at Department of Pathology, Institute of Clinical Medicine, University of Oslo, Norway and working in the Jahnsen lab. My job profile at Klinmed UiO

⚡ I have been developing open-source bioinformatics tools downloaded by thousands including MirMachine and cellsnake.
🔭 My research interests include biostatistics, bioinformatics, molecular epidemiology, spatial transcriptomics, single-cell and bulk RNA sequencing, early detection of cancer using ML and AI, RNA biology of cancer and RNA-RNA interactions.
🔭 I also have bioinformatics pipelines written in Snakemake (also in Python and R) like a small RNA sequencing pipeline, sncRNA-workflow, or a WGS pipeline for HPV variant detection (TaME-seq)
🌱 I completed my doctoral studies in the fields of Biotechnology and Bioinformatics at the University of Canterbury in New Zealand. My research concentrated on the non-coding RNAs in prokaryotic organisms. The primary emphasis of my dissertation was on the interactions between non-coding RNAs and messenger RNAs within the genomes of bacteria and archaea.

Hello there 👋

I am a senior bioinformatics research scientist at Department of Pathology, Institute of Clinical Medicine, University of Oslo, Norway and working in the Jahnsen lab. My job profile at Klinmed UiO

⚡ I have been developing open-source bioinformatics tools downloaded by thousands including MirMachine and cellsnake.
🔭 My research interests include biostatistics, bioinformatics, molecular epidemiology, spatial transcriptomics, single-cell and bulk RNA sequencing, early detection of cancer using ML and AI, RNA biology of cancer and RNA-RNA interactions.
🔭 I also have bioinformatics pipelines written in Snakemake (also in Python and R) like a small RNA sequencing pipeline, sncRNA-workflow, or a WGS pipeline for HPV variant detection (TaME-seq)
🌱 I completed my doctoral studies in the fields of Biotechnology and Bioinformatics at the University of Canterbury in New Zealand. My research concentrated on the non-coding RNAs in prokaryotic organisms. The primary emphasis of my dissertation was on the interactions between non-coding RNAs and messenger RNAs within the genomes of bacteria and archaea.

Hello there 👋

I am a senior bioinformatics research scientist at Department of Pathology, Institute of Clinical Medicine, University of Oslo, Norway and working in the Jahnsen lab. My job profile at Klinmed UiO

⚡ I have been developing open-source bioinformatics tools downloaded by thousands including MirMachine and cellsnake.
🔭 My research interests include biostatistics, bioinformatics, molecular epidemiology, spatial transcriptomics, single-cell and bulk RNA sequencing, early detection of cancer using ML and AI, RNA biology of cancer and RNA-RNA interactions.
🔭 I also have bioinformatics pipelines written in Snakemake (also in Python and R) like a small RNA sequencing pipeline, sncRNA-workflow, or a WGS pipeline for HPV variant detection (TaME-seq)
🌱 I completed my doctoral studies in the fields of Biotechnology and Bioinformatics at the University of Canterbury in New Zealand. My research concentrated on the non-coding RNAs in prokaryotic organisms. The primary emphasis of my dissertation was on the interactions between non-coding RNAs and messenger RNAs within the genomes of bacteria and archaea.

Hello there 👋

I am a senior bioinformatics research scientist at Department of Pathology, Institute of Clinical Medicine, University of Oslo, Norway and working in the Jahnsen lab. My job profile at Klinmed UiO

⚡ I have been developing open-source bioinformatics tools downloaded by thousands including MirMachine and cellsnake.
🔭 My research interests include biostatistics, bioinformatics, molecular epidemiology, spatial transcriptomics, single-cell and bulk RNA sequencing, early detection of cancer using ML and AI, RNA biology of cancer and RNA-RNA interactions.
🔭 I also have bioinformatics pipelines written in Snakemake (also in Python and R) like a small RNA sequencing pipeline, sncRNA-workflow, or a WGS pipeline for HPV variant detection (TaME-seq)
🌱 I completed my doctoral studies in the fields of Biotechnology and Bioinformatics at the University of Canterbury in New Zealand. My research concentrated on the non-coding RNAs in prokaryotic organisms. The primary emphasis of my dissertation was on the interactions between non-coding RNAs and messenger RNAs within the genomes of bacteria and archaea.

Sinan U. Umu sinanugur

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